| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3663 |
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| Symbol | |
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| ID | 5060139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4201321 |
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| End bp | 4202340 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475919 |
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| Product | DNA primase, small subunit |
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| Protein accession | YP_001160472 |
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| Protein GI | 145596175 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.735103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGT CGACGGCCGG GCGTGTTGAC CGTTGCCTCC GTTGCCGGCA GGGTGACCGG
ATGGGCAAGG TCGAGGAGAC CCGGGACGGG GTCGCACTGA CTAACCTGAG TCAGCCGCTG
TTCGACGGGG CGGGCGCAAC AAAGCGCGAT CTGGTGAACT ACCTGGACAC GGTGCGCGAC
CGAATCTTGC CTCACCTGCG GGAACGGCCG CTGTCAGTCA TGCGGGTGCG CCCCGGGCAG
CCCCCGTTCA TGCAGAAGAA CCTGCCGAAA TACACCCCGA ACTGGATTCC TCGTACGGGG
GTGTGGGCGG CAGCCTCGCA CCGCGAGATC TCGTACGCCC TCTGCGGCGA CCGACGCACA
CTGCTCTGGC TCGCCAATCA GCGGGCGGTG GAATTCCACC CCACCCTCGC CACGGTCGCC
GCCCTGCAAC GTCCGACCCA CCTCGTGCTC GACCTGGACC CGCCGGAGGG CGCCCTGTTC
GAGGTGGTGG TGGCCGCGGC CCTCCTGGTC CGACGGGCTC TCGCCGGTGC CGGGCTCGCC
GGGGTGGTGA AGACCAGCGG CGCCAAGGGA GTGCACGTGT TCGTGCCGGT GACGGGGGAT
GCGACGGCAG AGGATCTGGC AGCTGCCACC CGAGCGATCG CGTTCCGGGC GGCACGCCTC
GGCCCGGACC TCGCGACGAC CGCCTTCATC CGGGAGGACC GGAGTGGGAA GGTCTTCATC
GACTCCACCC GAGCTGGCGG GGCGACGGTG GTGGCCGTGT ACAGCCCGCG GCTACGGCCG
GGCGTGCCGG TTTCGTTCCC GGTGCCCTGG GACATCCTGC CCTCGGTCAC GCCCGCCGAC
TTCACGATTC AGACCGCGCC CGCCCTGGTC GCCACCGGGG ATCCGTGGGC GGACGGAATG
CCCACGGCGC AACAGCTCCC GGCCGACCTG GTCGCCGAGG GGCGCACCAT CCCGGTGGCC
CGGGTGCAGG CGATGCAGGA GGGGAAGCGT CGGGCCCGTG CCCGGCGGGC CGCCGGCTGA
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| Protein sequence | MFASTAGRVD RCLRCRQGDR MGKVEETRDG VALTNLSQPL FDGAGATKRD LVNYLDTVRD
RILPHLRERP LSVMRVRPGQ PPFMQKNLPK YTPNWIPRTG VWAAASHREI SYALCGDRRT
LLWLANQRAV EFHPTLATVA ALQRPTHLVL DLDPPEGALF EVVVAAALLV RRALAGAGLA
GVVKTSGAKG VHVFVPVTGD ATAEDLAAAT RAIAFRAARL GPDLATTAFI REDRSGKVFI
DSTRAGGATV VAVYSPRLRP GVPVSFPVPW DILPSVTPAD FTIQTAPALV ATGDPWADGM
PTAQQLPADL VAEGRTIPVA RVQAMQEGKR RARARRAAG
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