| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3654 |
|---|
| Symbol | |
|---|
| ID | 5060129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4188038 |
|---|
| End bp | 4188859 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475909 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160463 |
|---|
| Protein GI | 145596166 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA GCACCCCGGG CGGCCCGGAG CGCCGCCCGA CCGTTGCCAG CACCGCGAAG
AAGCCGGCCG GGGGCAGGCC GGCCAGTGGC AAGCCCGGGT CCGGCAAGCC AGCGGGCGGC
AAAGCGGGGT CCGGCAAACC CGTGGGCAGT CAGCGCGGCG GCAAGGGGCC ACGCAAGCCA
ATCACCCCGG TCAAGGTAAG CCAGAGTCGC AACTGGGGGC CGATCGCCCT CTTCGTCGCC
GTCGGCGTAC TCGCCGTCGC AATCGTCGGC TATGGCGGCT GGGCGACATT CCAGGGCTCC
AAGCCGTGGG ACGAGCGGGC GGACGCTATC GCCGGCATCG TCAACTACCG CGAGAAGGAT
CCGGAGCTGG TCACGGGCGG TAACCACCAG CAGGGCTCGA TCGAGTACTC CATCCTGCCT
CCGGTCGCCG GCCCCCACAA CGACGCCTGG CAGAACTGCA TGGGCGACAT CTACGACGCC
CCGATCGCCA GCGAGCACGC CGTGCACAGC CTGGAGCACG GTGCGGTGTG GATCACCTAC
CAGCCCGACC TCGACGCCGG CCAGGTCGAG AAGTTGGCCG AGCGGGTACG CGGCAACGAA
AAGCTCTTCC TCAGCCCGTA CGAGGGCTTG GACGCCGCGA TCTCACTACA GGCCTGGGGC
TACCAGCTCA AGGTCGACAA CGCCGACGAC AGCCGGATCG ACGACTTCAT CAAGACGCTG
AAGGTCAACG CCTCGGTCGA GGGCCCAACC GCCCTCTGCG CCCAGGGTGT CACCGCCACC
GGCACCACTC CGCGGGAGCT CGGCCCGCAG ATGCCGCAGT AG
|
|---|
| Protein sequence | MSISTPGGPE RRPTVASTAK KPAGGRPASG KPGSGKPAGG KAGSGKPVGS QRGGKGPRKP
ITPVKVSQSR NWGPIALFVA VGVLAVAIVG YGGWATFQGS KPWDERADAI AGIVNYREKD
PELVTGGNHQ QGSIEYSILP PVAGPHNDAW QNCMGDIYDA PIASEHAVHS LEHGAVWITY
QPDLDAGQVE KLAERVRGNE KLFLSPYEGL DAAISLQAWG YQLKVDNADD SRIDDFIKTL
KVNASVEGPT ALCAQGVTAT GTTPRELGPQ MPQ
|
|---|
| |