| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3646 |
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| Symbol | |
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| ID | 5060121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4173922 |
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| End bp | 4175949 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475901 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001160455 |
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| Protein GI | 145596158 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGC CGGAGCTTCA GAGCCTGGCC GCGTCGCTCG GCATCTCGGG CACGGCTCGC
ATGCGCAAGG GTGAGCTGAT CAGCGCGATC ACCGAGCGCC AGGGTGGCGG GGCAGCCACC
GGAACCCCTC GACCGCGGGC CGAGGTTGCG GCTGCCGCGG CCCCCGCCCG GGGGGAGGTC
CACGCGGAGG TCCGGGAGTC GGGCGAGCGG GCGGAGACCG AGTCGCGTCC CGCCGAGCAG
CCGACGACCA CCCCGACCAC CGGCCGGGCC CGTGGCCGGC GTAGCCGTGC GGTCAGTGAG
GCCGGTGAGG CCCGCGCTGA GACGCGACCG GAGGAGGCCG AGGCCGGCGA ACGCCGGGAG
CGTGGTGAAG GCCGCGGTGG CCGGGACCGT GCTGAGCGCG GCGAGCGTGC TGAGCGTGGC
GAGCGTGCTG AGCGGGGCGA GCGTGCTGAG CGTGGCGAGC GTGCTGAGCG GGGCGAGCGT
GCTGAGCGGG GCGAGCGTGC TGAGCGGGGC GAGCGTGCTG AGCGGGGCGA GCGTGCTGAG
CGTGGCGAGC GTGCTGAGCG GGGCGAGCGT GCTGAGCGGG GCGAGCGTGC TGAGCGGGGC
GAGCGTGCTG AGCGTGGCGA GCGCGGTGAG CGTGGCGAGC GTGCTGAGCG GGGCGAGCGT
GCTGAGCGGG GCGAGCGCGG TGACCGTGGC GAGCGTGCTG AGCGTGGCGA GCGCGGTGAC
CGTGGCGAGC GTGCTGAGCG GGGCGACCGG AACGACCGTG GCCAGCGTGA CAACGACGGC
GAGGAGGAGA ACGAGGGCGG CGGTCGGCGT GGCCGGCGCA GCCGCTTCCG GGATCGTCGG
CGCGGCCGTG GCGACCGGGA CGGCGACGGT GGGCGGGAGC CCCAGGTCAG CGAGGACGAT
GTCCTCGTCC CGGTAGCGGG CATCATCGAT GTGCTCGACA ACTACGCCTT CGTCCGGACC
ACCGGCTATC TGGCCGGGCC GAATGACGTT TACGTCTCTA TGTCCCAGAT TAAGCGGTAC
GGTCTGCGGC GTGGTGACGC GATCACCGGT GCCGTCCGCG CGGCGCGGGA GGGCGAGCAG
CGGCGGGACA AGTACAACCC GCTGGTCCGG CTGGACACCA TCAACGGGAT GGAGCCGGAG
GAAGCGAAGC GCCGGCCGGA GTTCTATCGA CTCACCCCGC TCTACCCGCA GGAGCGGCTG
CGGCTGGAGA GCGAGCCGCA CATCCTCACC ACTCGGGTGA TCGACCTGGT GATGCCGATC
GGCAAGGGCC AGCGGGCGCT TATCGTTTCG CCGCCCAAGG CCGGCAAGAC GATGGTGTTG
CAGGCGATCG CGAACGCGAT CACCCACAAC AACCCGGAGT GCCACCTGAT GGTGGTGTTG
GTGGACGAGC GTCCAGAAGA GGTCACCGAC ATGCAGCGGT CGGTGAAGGG CGAGGTCGTC
GCGGCAACCT TCGACCGGCC GCCGCAGGAC CACACCACCG TCGCCGAGTT GGCGATTGAG
CGGGCGAAGC GCCTGGTCGA GCTGGGCCAC GACGTGGTCG TGCTGCTGGA CTCGGTGACG
CGGCTTGGTC GGTCGTACAA CCTGGCGGCG CCGGCCAGCG GCCGGATCAT GTCGGGTGGT
ATCGACTCCA CCGCGTTGTA CCCGCCGAAG CGGTTCCTGG GTGCGGCCCG CAACATCGAA
AACGGTGGTT CGCTGACCAT CCTCGCCACC GCGCTGGTGG AGACCGGTTC GACGGCGGAC
ACGGTCATTT TCGAGGAGTT CAAGGGCACC GGTAACGCGG AGCTGAAGCT GGATCGGAAG
ATCGCCGACA AGCGGACCTT CCCGGCCATC GACATCCACC CGTCCGGTAC GCGTAAGGAG
GAGATCCTGC TCGCGCCGGA GGAGCTGGCC ATCGTCCACA AGCTCCGGAA GGTGCTGCAC
GCGCTGGACT CACAGGCCGC GCTGGACCTG CTGCTGGACC GGCTCAAGAA GTCGCGGACC
AACATCGAGT TCCTGATGCA GATTGCGAAG TCGACGCCAG GGGAGTGA
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| Protein sequence | MLLPELQSLA ASLGISGTAR MRKGELISAI TERQGGGAAT GTPRPRAEVA AAAAPARGEV
HAEVRESGER AETESRPAEQ PTTTPTTGRA RGRRSRAVSE AGEARAETRP EEAEAGERRE
RGEGRGGRDR AERGERAERG ERAERGERAE RGERAERGER AERGERAERG ERAERGERAE
RGERAERGER AERGERAERG ERAERGERGE RGERAERGER AERGERGDRG ERAERGERGD
RGERAERGDR NDRGQRDNDG EEENEGGGRR GRRSRFRDRR RGRGDRDGDG GREPQVSEDD
VLVPVAGIID VLDNYAFVRT TGYLAGPNDV YVSMSQIKRY GLRRGDAITG AVRAAREGEQ
RRDKYNPLVR LDTINGMEPE EAKRRPEFYR LTPLYPQERL RLESEPHILT TRVIDLVMPI
GKGQRALIVS PPKAGKTMVL QAIANAITHN NPECHLMVVL VDERPEEVTD MQRSVKGEVV
AATFDRPPQD HTTVAELAIE RAKRLVELGH DVVVLLDSVT RLGRSYNLAA PASGRIMSGG
IDSTALYPPK RFLGAARNIE NGGSLTILAT ALVETGSTAD TVIFEEFKGT GNAELKLDRK
IADKRTFPAI DIHPSGTRKE EILLAPEELA IVHKLRKVLH ALDSQAALDL LLDRLKKSRT
NIEFLMQIAK STPGE
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