| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3636 |
|---|
| Symbol | |
|---|
| ID | 5060111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4164146 |
|---|
| End bp | 4164925 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640475891 |
|---|
| Product | ATP synthase F0, A subunit |
|---|
| Protein accession | YP_001160445 |
|---|
| Protein GI | 145596148 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.595965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGAC AGCTGGTCGT CGCCCAGGAC CTTCCCTGGC CCCCCAGCGT CAATGACTTC
TACCCGCCAG CGGTGGCTGG ACCGTGGGTC ACGAAGTTCA CCCTCATGGT CTGGCTGGCC
GTCGGGCTGG TGATCGTCTT CTACATGGCC ACCTACCGGA ATCCGAAGCT GGTCCCCAGC
AAGGGGCAGT GGCTGGCCGA GTCGGTCTAC GGGTTGGTTC GGGACAACAT CGTCCGGGAG
CAGATGGGCA ATGCCGGAAT CCGGTTCGCC CCCTACTTCA CGGTGCTCTT CAGCTTTATT
CTGGTTACCA ACATCTTCAG CATCGTTCCC GGGCTGCAGA TCTCGCCGAA CGCGCACATC
GCCTTCCCGA TCGTGCTCTC GGTGATCTCC TACGTGCTCT ACCTCGCGGT CGGGATCCGC
AAGCACGGTC TCCTCAAGTA CCTCAAGATG AGCCTGATCC TGCCGGGCGT GCCGTGGCCG
ATGCACTTCC TGCTGATCCC GATCGAGTTC CTGCAGAACT TCGTCGTGCG GCCGGTTACC
CTGGCCCTCC GGCTCTTCGC CAACATGTTC GCCGGGCACC TGCTCCTGCT GGTCTTCACC
GTCGGTGGCT TCGTGATGCT CTCCGCGGAC AACCTCTTCG TTCAGGTGAC CTCGGTCTTC
TCCTTCGCGA TGGCGATCGT GATGGCCTTC TTCGAGGCGC TGGTGGCCGT GCTGCAGGCG
TACGTCTTCG TCACGCTGTC CGCCAACTAC GTCGGCACCT CGCTCGCCGA GGAGCACTGA
|
|---|
| Protein sequence | MSGQLVVAQD LPWPPSVNDF YPPAVAGPWV TKFTLMVWLA VGLVIVFYMA TYRNPKLVPS
KGQWLAESVY GLVRDNIVRE QMGNAGIRFA PYFTVLFSFI LVTNIFSIVP GLQISPNAHI
AFPIVLSVIS YVLYLAVGIR KHGLLKYLKM SLILPGVPWP MHFLLIPIEF LQNFVVRPVT
LALRLFANMF AGHLLLLVFT VGGFVMLSAD NLFVQVTSVF SFAMAIVMAF FEALVAVLQA
YVFVTLSANY VGTSLAEEH
|
|---|
| |