Gene Strop_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3624 
Symbol 
ID5060099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4152910 
End bp4153761 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content68% 
IMG OID640475879 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001160433 
Protein GI145596136 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTC GACTCGCGGT CGTCGGTGCT GGACTGATGG GCTCGGGAAT CGCCCAGGTC 
GCGGCACAGG CGGGCTGGCA GGTGACGCTG CGGGACCTGG ACGACGCGGC CACGAAGCGG
GGCCTGGAGG GCATTCAGCG GTCGCTGGAG AAGTTCGCCG AGAAGGGGAA GATCTCGTCA
GCCGATGCCG AGGCGGCGCT CGGCCGGATC ACCCCCACCA CCGACCTGGG GGCTGCCGCC
GACGCGGACA TCGTTGTCGA GGCGGTCTTT GAGAAGCTCG AGCTCAAGCA CGAGATCTTC
CGCGCGTTGG ACAAGATCTG CAAGGCGGAT GCGGTGCTCG CCACCAACAC CTCGGCGATC
CCGGTCACCC AGATCGCCGC CGCCACCGAG CGCCCGGAGT CGGTTGTCGG CACCCACTTC
TTCTCCCCGG TACCGATGAT GAAGCTGTGC GAGTTGGTCC GCGGCTACAA GACCAGCGAC
GCCACCATCG GTACGGCGAG GGCCTTCGCC GAGGAGATCG GCAAGACGGT CGTGGTCGTC
AACCGGGACA CCGCCGGCTT CGTCACCACC CGGCTGATCT GCGCGTTGGT GATGGAGGCG
GTCAGCCTGG TCGAATCCGG CGTGATCTCC GCCGAGGACC TGGACAATGC CTGCAAGCTG
GGCTTCGGCC ACGCCATGGG CCCGCTGGCG ACGGTGGACC TGACCGGGGT GGATGTTCTG
CTCAACGCCA CCCGCAACAT CTACACCGAC ACCGCGGACG AGAAGTTCTT CCCCCCGGAG
CTGCTCCAGC GGATGGCCGC CGCCGGTGAC CTGGGCCGCA AGACCGGCCA GGGCTTCTAC
TCGCACGGAT AG
 
Protein sequence
MAGRLAVVGA GLMGSGIAQV AAQAGWQVTL RDLDDAATKR GLEGIQRSLE KFAEKGKISS 
ADAEAALGRI TPTTDLGAAA DADIVVEAVF EKLELKHEIF RALDKICKAD AVLATNTSAI
PVTQIAAATE RPESVVGTHF FSPVPMMKLC ELVRGYKTSD ATIGTARAFA EEIGKTVVVV
NRDTAGFVTT RLICALVMEA VSLVESGVIS AEDLDNACKL GFGHAMGPLA TVDLTGVDVL
LNATRNIYTD TADEKFFPPE LLQRMAAAGD LGRKTGQGFY SHG