Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3624 |
Symbol | |
ID | 5060099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4152910 |
End bp | 4153761 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640475879 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001160433 |
Protein GI | 145596136 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTC GACTCGCGGT CGTCGGTGCT GGACTGATGG GCTCGGGAAT CGCCCAGGTC GCGGCACAGG CGGGCTGGCA GGTGACGCTG CGGGACCTGG ACGACGCGGC CACGAAGCGG GGCCTGGAGG GCATTCAGCG GTCGCTGGAG AAGTTCGCCG AGAAGGGGAA GATCTCGTCA GCCGATGCCG AGGCGGCGCT CGGCCGGATC ACCCCCACCA CCGACCTGGG GGCTGCCGCC GACGCGGACA TCGTTGTCGA GGCGGTCTTT GAGAAGCTCG AGCTCAAGCA CGAGATCTTC CGCGCGTTGG ACAAGATCTG CAAGGCGGAT GCGGTGCTCG CCACCAACAC CTCGGCGATC CCGGTCACCC AGATCGCCGC CGCCACCGAG CGCCCGGAGT CGGTTGTCGG CACCCACTTC TTCTCCCCGG TACCGATGAT GAAGCTGTGC GAGTTGGTCC GCGGCTACAA GACCAGCGAC GCCACCATCG GTACGGCGAG GGCCTTCGCC GAGGAGATCG GCAAGACGGT CGTGGTCGTC AACCGGGACA CCGCCGGCTT CGTCACCACC CGGCTGATCT GCGCGTTGGT GATGGAGGCG GTCAGCCTGG TCGAATCCGG CGTGATCTCC GCCGAGGACC TGGACAATGC CTGCAAGCTG GGCTTCGGCC ACGCCATGGG CCCGCTGGCG ACGGTGGACC TGACCGGGGT GGATGTTCTG CTCAACGCCA CCCGCAACAT CTACACCGAC ACCGCGGACG AGAAGTTCTT CCCCCCGGAG CTGCTCCAGC GGATGGCCGC CGCCGGTGAC CTGGGCCGCA AGACCGGCCA GGGCTTCTAC TCGCACGGAT AG
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Protein sequence | MAGRLAVVGA GLMGSGIAQV AAQAGWQVTL RDLDDAATKR GLEGIQRSLE KFAEKGKISS ADAEAALGRI TPTTDLGAAA DADIVVEAVF EKLELKHEIF RALDKICKAD AVLATNTSAI PVTQIAAATE RPESVVGTHF FSPVPMMKLC ELVRGYKTSD ATIGTARAFA EEIGKTVVVV NRDTAGFVTT RLICALVMEA VSLVESGVIS AEDLDNACKL GFGHAMGPLA TVDLTGVDVL LNATRNIYTD TADEKFFPPE LLQRMAAAGD LGRKTGQGFY SHG
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