| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3615 |
|---|
| Symbol | |
|---|
| ID | 5060090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4142232 |
|---|
| End bp | 4143470 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160424 |
|---|
| Protein GI | 145596127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACCGG GCGAGCCGGA TTCGCCGGGA CCGACCGGTC GACCGGGCCG GCCGGCCGGC
GACCAGCCGG CGGCGCCGGA ACCGCCCGCC GCGGCAGCTC CGACTCCCGG CGACGCCACC
GCGGTCGACA ACGCGTCCGC CGAGCCCTCG ATCCCACCCG AGGCGCAGCA GCACCGAGCC
AGCCAGGGGT CTGGGCGGTT CGGTGTGCCG GGGCGGCCCC TGCGACGTAA CAGCTTCCTC
GTCGGCCTCA CCGGCGGTCT CGGCGCGCTG CTGGCCTACG CCCTCTTCCT CGGCCTCCGC
AACGCCGCCG GCCTACTCGT CCCCGTAGTG ATCGCGGTCT TCCTCGCCGT CGGGCTCTAT
CCGGCGGTGG CGCGGCTACG CCGGCTCGGG CTGCCCCACG GGCTGGCGGT CGCGGTCGTC
ATGCTGACCC TGCTCCTCCT GTTCTGTAGC GGCGTGGTCG CCCTGGTGCC ACCGGTCGTC
ACCCAGTCCA ACCAGTTCAT CGAACAGTTC CCCAGCTATC TGGAAGCGCT ACAGCGCAAC
GAGACCGTCA ACGAGCTGAT CGAACGGTAC GACCTGGTGG AACGGGCCCA GCAGGCCGCG
GACACCGACG CCCTCGGCCA GGCACTCGGC GGAGTACTCG GCGGCGCCCA GCTCATCTTC
GGCACCGCCT TTCGGACCCT GACCGTACTC GTACTCACCA CCTACTTCCT GGCGTACTTC
AACCGACTAC GGTCGCTCGG GTACGCGCTC GTTCCCCGGT CCCGTCGGGA TCGGGTACGC
CTCATCGGCG ACGAAATCAT CGTCAAGGTC GGCGCGTACA TCGTCGGGGC GCTCATCATC
GCCATCCTCG CCGGCACGAC CACCTTCGTC TTCGCGTTGA TTGCCGAGTT GCCGTACCCG
TTCGCCCTGG CCGTCGTGGT CGCGGTGACC GACCTGATCC CGCAGATCGG TGCCACGCTC
GGGGCGGTGA TCGTGAGCCT GGTCGGCTTC GCCACTGATC TACCGGTAGG GATCGCCTGC
GTGTTGTTCT TCCTCATCTA CCAGCAGGTG GAGAACTACC TGATCTACCC CAAGGTGATG
CGCCGGTCGG TGCAGGTCAA CGAGGTAGCC GCCCTGGTGG CGGCGCTGCT CGGCGTCGCC
CTGATCGGCG TGGTCGGCGC CCTCATCGCG ATCCCCACCG TCGCGGCGTT CCAGCTGATC
CTGCGCGAGG TGGTCATCCC ACGCCAGGAT TCCCGCTAG
|
|---|
| Protein sequence | MAPGEPDSPG PTGRPGRPAG DQPAAPEPPA AAAPTPGDAT AVDNASAEPS IPPEAQQHRA
SQGSGRFGVP GRPLRRNSFL VGLTGGLGAL LAYALFLGLR NAAGLLVPVV IAVFLAVGLY
PAVARLRRLG LPHGLAVAVV MLTLLLLFCS GVVALVPPVV TQSNQFIEQF PSYLEALQRN
ETVNELIERY DLVERAQQAA DTDALGQALG GVLGGAQLIF GTAFRTLTVL VLTTYFLAYF
NRLRSLGYAL VPRSRRDRVR LIGDEIIVKV GAYIVGALII AILAGTTTFV FALIAELPYP
FALAVVVAVT DLIPQIGATL GAVIVSLVGF ATDLPVGIAC VLFFLIYQQV ENYLIYPKVM
RRSVQVNEVA ALVAALLGVA LIGVVGALIA IPTVAAFQLI LREVVIPRQD SR
|
|---|
| |