| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3607 |
|---|
| Symbol | |
|---|
| ID | 5060082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4130390 |
|---|
| End bp | 4131292 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475862 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001160416 |
|---|
| Protein GI | 145596119 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.150797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC CACGGATCAC CCCGTCGATC TTTACCCGCG GCGCGGTAGA CCTCAGCGCG
CTGCGCACCC CCGCACCCTC CCCGGCCCCC GCGCCTGCCC AGTCCGGCCC GTCCGATGAC
GGCGTCGGGA GCACTGCCGC CGTCATCGAT GTTTCCGAGG CAACCTTCCA GGCAGAGGTC
CTTGAACGGT CGCTCAGTAC ACCGGTGGTC GTCGATTTCT GGGCCGAGTG GTGCGAGCCC
TGTAAGCAGC TCTCGCCGGT ACTCGAGCGG CTCGCCGTCG AGGGCGCCGG CGCCTGGGTG
CTGGCCAAGG TCGACGTGGA CGCCAACCCC CGGCTGGCGC AGATGTTCCG GGTACAGGGC
ATCCCGATGG TCTACGCGGT GGTCGGCGGC CAGCCGGTTG ACGCGTTCTC CGGAGTGGTG
CCCGAGGCGC AGCTACGGCA GTGGATCCAG GCGGTTCTCA AGGCTGGTGG CGCGACTGTG
GCCGAGACGG CCGATCCACG GTTGGACGAG GCCGACGAGT CGCTGCTCAA CGGCGACCTG
GACACCGCGG AGCAGGCGTA CCGCAAGATT CTGGCCGAGA CGCCCTCGGA CGCCGCGGCG
GAGGCAGGCC TGGCCCAGGT CGGGCTTGCC CGTCGGGTCG CCGGTGCTGA CCCGCAGGCG
GTGCTCACCG CGGCGGCCGC GGCAACCGAC GACGTCGACG CCCAGCTGCT CGCCGCCGAT
GTCGAGGTGC TCGGCGGGAT GGCGGAACAG GCCTACCAAC GTCTGGTCGG GCTGGTTCGC
CGTACCGCCG GCGAGGACCG CGAGAAGGTA CGTCAGCACC TCGTCGGCCT CTTCACCATC
GCCGGTCCCG ACGATTCCGC GGTGGCGCTG GCCCGTCGGG CACTGGCCAG CGCCCTGTTC
TGA
|
|---|
| Protein sequence | MSDPRITPSI FTRGAVDLSA LRTPAPSPAP APAQSGPSDD GVGSTAAVID VSEATFQAEV
LERSLSTPVV VDFWAEWCEP CKQLSPVLER LAVEGAGAWV LAKVDVDANP RLAQMFRVQG
IPMVYAVVGG QPVDAFSGVV PEAQLRQWIQ AVLKAGGATV AETADPRLDE ADESLLNGDL
DTAEQAYRKI LAETPSDAAA EAGLAQVGLA RRVAGADPQA VLTAAAAATD DVDAQLLAAD
VEVLGGMAEQ AYQRLVGLVR RTAGEDREKV RQHLVGLFTI AGPDDSAVAL ARRALASALF
|
|---|
| |