| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3605 |
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| Symbol | |
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| ID | 5060080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4123854 |
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| End bp | 4128911 |
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| Gene Length | 5058 bp |
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| Protein Length | 1685 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640475860 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001160414 |
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| Protein GI | 145596117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.194242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGC GTCCGGCTAC CAAACCGGGA CCCGACCTCC GGCAGGTTGA TACCGGCCGG
GACGACAACT TCGATTCGGC GACCGATTCC GATGGGTTCG GTGACGTCGA GACTGGTGTG
ACCGGCCTGA CCGGTTCGAG CATCGACTCG ATCTACGACT TGGGTCTGCC CGCCAATGCG
TTGGGGGAGG ACGCCGAGGA TTCGGACCTC GACGAAGCGG TACCCAACGC GGAGCGCCTG
GTGGCGCAGG CGATCGCGCT CGCCGCCGAC GACCACGACT CGGCGTCGCT GGTCCGCCGT
TACTGGCGAT TCGCACCAGA CGAGGAGCTG ATCGGCTTTA CCGCCGAGGA GATGCTCGAC
TCCGTACGAA CCCACCGGGA GCTGGCCGAG CAGCGGGTGC CGGGCGAGCT CAAACTTCGC
ATCCACGAGC CGGACGCCGA CCAGCACCAC TCGGTGGTCG AGATCGTCAC CGACGACATG
CCCTTCCTGG TGGACTCGGT GACCGCCCTG CTCAATTCGC ATCACCTGGA TGTCCACCTA
CTGGTCCATC CGTTGTTGGT GATACGGCGC GAGCCGCTGG GCCGGCTGAT CGAGGTGGCC
GCCGACGTGG AGCCCGACGA GGTGACCACC GGCGGCTTGA TCGAGAGCTG GATGCGGATC
GAGATCGACC CGGTCCGGGA CGCGGCGGAC CGGGACAACC TGCGTCGGGA GCTACAACGA
GTCCTCACCG ACGTACGGGA GGCGGTCGAG GACTGGCCCA GGATGCGTCA GCAGGCGCTG
ACGCTCGCCG ACGAGCTGGC GGCCGCGCGG AACAGCGAGA ACCGGCCGCC GGTGCCGGAG
AAGGACATCA CCGACTCGGT CGAGTTGCTG CGCTGGCTCG CCCACGACCA CTTCACCTTT
CTCGGCTACC GGGAGTATCG CCTGGTGGAC GCCGAGGGTG AGACGGGCGG TAAGGCCCTG
AGGGCGGTGC TCGGCACCGG CCTCGGGATC CTGCGCTCGG ACTCCACGGA GTCCCGGGCG
CTGTCGTCGA TGACTCCCGA GGCGCACGAG CGGGTTACCG AGAAGCGCCT GCTGGTCATC
ACCAAGGCGA ACTCACGGGC GACCGTGCAC CGATCCGCGT ACCTGGACTA CATCGGCTTC
AAGGTGTTCG ACGAGGCCGG CGAGGTGGTC GGGGAACGTC GGTTCATCGG CCTGTTCTCC
ACCGCCGCGT ACCGCACCAG CGTGCAGGAG CTGCCGGTGG TACGGCGCAA GGTGGCGGAG
GTGGTCGATC GGTGCGGCCT GAGCCTGCGT AGCCACTCCG GCAAGGATCT GCTCCAGATC
CTGGAGACCT ATCCGCGCGA CGAGCTGTTC CAGATCAAGA CCGATGACCT GTACCACGCG
GTGACCGGTG TGCTGCGGAT GGCCGGCCGC CGTCAACTGC GGGTGTTCCT GCGCCGGGAC
GCGTACGGAC GCTTCATCTC CTGTCTGATC TATCTGCCGC GGGACCGGTT CACCACCCAG
AACCGGCTGC GGATGCAGGA CATCCTGCTG CGGGAGCTGA ACGGGGTCGG GGTCGACTAC
ACCACCCGGG TTACCGAGTC GATGCTGGCC CGGGTGCACT TCATTGTCCG TACCGACCCG
ACCAAGCCGC CGGAGGATAT CGACGCCGAC CTGCTCGCCG AGGAGCTGGC CGACGCCACT
CGCCTCTGGG ACGACGACTA CCGGCTGGTG CTGGAGCGCA AGCTCGGCGA CGAGCAGGCC
AAGCACCTCT TCTCCCGGTA CGCCGACGCC TTCCCGGAGG GCTACAAGGA TGGGCACACG
CCGTACGAGG CGATGAAGGA CCTGGCGAAG CTGGAGCTGC TGGAGGAGCC CGGCCAGCTG
GAGATGCACC TGTTCCGTAA GCAGCTGGCG CCCCGCGCGA CGAGTCGGGT GACCGGCGAT
GACGAGTCGA TGGACGTCCG GTTCAAGGTG TACCGGTATG GCGAGCCGAT GATGCTCTCG
GCGGTGCTGC CGGTGTTGCA CTCGCTCGGG GTGAAGGCGG TTGACGAGCA CCCGTACGAG
GTAGAGCGCA TTGACGGTCG GATCTGGCTG TACGACTTCG GCCTGCGGTT GCCGGAGGGA
CACCAGGAGC TGGCCGAGGT TCGCCCGCAC GTGGAGAACG CCTTCGCGGC GGCGTGGCGG
GGCGAGGCCG AGGTCGACGG CTTCAACTCG CTGGTCCTGC GCGCCGGCCT CACCTGGCGG
CAGGTGGTCG TGTTGCGGGC GTACGCCAAG TACCTGCGTC AGGCGGGCAC GGTCTTCTCC
CAGGACTACA TGGAGTCGAC GTTCATCGCG TATCCGCGGA TCGCGGCCCT GCTGGTGCGG
CTCTTCGAGG CCCGGTTCGC GCCGGGCTCA ACGGGCGCCG AGGGGCGTCA GCAGCAGAGC
AAGGAGCTGG TCGCTGAGCT GCGTGCCGCG CTCGACGACG TGGCCAGCCT CGACCAGGAC
CGGATTCTTC GGTCGTACCT GACGCTGATC CAGGCCACCT TGCGAACGAG CTTCTACCAG
AAGCGCGCTG ACGGGCGGCC GAAGCCGTAT GTTGCCCTGA AGCTGGATCC GCAGGCGATT
CCGGACCTGC CGGCGCCGCG GCCCCGGTTC GAGATTTTCG TGTACTCGCC TCGGTTCGAG
GGTGTGCACC TGCGGTTCGG GCCGGTGGCC CGGGGCGGGT TGCGCTGGTC CGATCGGCGG
GAGGATTTCC GTACCGAGGT ACTCGGCCTG GTCAAGGCGC AGATGGTGAA AAACGCCGTG
ATCGTCCCGG TCGGCGCCAA GGGTGGCTTC GTGCTCAAGC AGAAGCCGGG CGACCGGGAC
GAGGCGGTGG CCTGTTACAA GGAATTCATC TCCGCGCTGC TGGACGCCAC CGACAACATC
GTCAGCGGCG AGATCGTGCC ACCGCCGGAT GTGGTTCGCC ACGACGGGGA TGACCCGTAC
ATGGTTGTCG CGGCGGACAA GGGCACCGCC ACCTTCTCCG ACATCGCCAA CGAGATCTCC
ACGGCCCACA ACTTCTGGCT GGGCGACGCG TTCGCCTCCG GCGGATCGGC GGGCTACGAC
CACAAGAAGA TGGGGATCAC CGCCCGCGGC GCCTGGGAGT CGGTGAAGCG GCACTTCCGC
GAGTTGGGGC ACGACACCCA GACCCAGGAA TTCACGGTGG TCGGCGTCGG CGACATGTCC
GGTGACGTCT TCGGCAACGG GATGCTGCTG TCGCGGCACA TCCGGCTGGT GGCCGCCTTC
GACCACCGGC ACATCTTCCT CGACCCGAAT CCGGACGCCA CCACCTCATG GTCGGAGCGG
AAGCGGCTGT TTGACCTGCC CCGGTCGATG TGGGATGAGT ACAACCCGGA GTTGATCTCC
GAGGGCGGCG GCGTGTTTCT CCGTACCGCG AAGTCGGTGC CGATCTCGCC CCAGGTGCGG
GCGGCGCTCG GTATCGAGGA CGGCGTGTCG CAGCTGAGCC CGCAGGAGCT GATGAAGGCG
ATCCTCACCG CCTCGGTCGA CCTGTTCTGG AACGGCGGCA TCGGCACCTA CATCAAGGCC
TCGACTCAGA CCAACGTCGA GGTGGGGGAC AAGTCCAACG ACGCGATCCG GGTTGACGGC
AAGGACTTGC GCTGCCGGGT CGTCGGTGAG GGGGGCAACC TGGGCTGCAC CCAGCTCGGC
CGGATCGAGT ACGCCGAGGC GGGTGGTCGG ATCTACACCG ACTTCATCGA CAACGCTGCC
GGGGTGGACT GCTCGGACCA CGAGGTGAAC ATCAAGATCC TGCTGAACAC GGCGGTTGCG
GACGGGGAGC TGACCGTTGG CGAGCGGGAC GAGTTGCTCG CCGAGATGAC CGACGAGGTC
GCCGAGTTGG TGCTGCGGGA CAACTACGAC CAGGCACGGG CGATCAGCAA CGCGCAGGCG
CAGGCACCGT CGTTGTTGCC GGTGCACCGG CGGATGATCG TTGACCTGGA GCGTTCCGGT
GCCCTGGACC GGGCGTTGGA GGCGCTGCCA CCGGACGAGG AACTGGCGGT CCGGATGGAG
TCCGGGATGA CGGCACCGGA GTTCGCGGTG CTTCTCTCGT ACGTCAAGAT CGTGCTCGAG
AAGGAGATCC TGGCGGAAGG CTTGGCCGAC GAGGAGTGGA CAACCGAGCT GCTGGTCAAC
TACTTCCCCA CGCCGATGCG GGAGCGGTTC GCCGACCGGA TGTTCCGCCA CCGGCTGCGT
CGGGACATCG TTACCACCCA GTTGGTGAAC GAGACGATCA ACCGGGGCGG TATCTCGTTC
GTCTACCGGG TGGTCGAGGA GACCGGGGCA AGCGCCGCCG ACGTGCTCCG CGCGTACGTG
GTGGTCCGCG AGGTGTTCGG GCTGCGCAGG ATCTGGAACG CCGTCGAGGA ACTGGACAAT
CGAGTCGCCC CTGACCTGCA GACCGACGTC TACCTGGACT TCCGGCGCCT GCTGGACCGG
GCGGTGCGGT GGCTGGTGAC GAACCGTCGC TCTCCGATCG ACGTGCCGGC GGAGATCGCG
CGGCTGCGCG ACGGGGTCGC CCACCTCCTG CCGCAGATGG AGAACCTCTT CTACGGCAGC
GAGCGGGAGG CGATCGCGGC GCACATCGAG TCGATGGTCG CCAAGGGATT GCCGCGGGAT
CTGGCGCAGC AGACGGTCCG GTTGATGTAC AGCTTCGGCC TGCTCGATGT CGTCGAGACC
GCGGCGAGCA GTGGGCGCGA CGTGTCCGAG GTCGCGTCGG TCTACTTCGT CCTGTCGGAC
CGGTTCCGGG TGGATTCGCT ACTGTCGAAG ATCTCGTTGC TGCCACGAGA GGACCGGTGG
CAGACACTGG CTCGGATGGC GCTGCGGTAC GACCTGTACG CCGCGCTCGC CGCACTGACC
ACCGAGGTGT TGGGGGGCAC CCCGGGCAAC CTGCCACCAG TGGAGCGGGT GCAGCAGTGG
GAGCAGTCGA ACGCTACCTC GATCCACCGT GCACAGCGGG CGATGGGGGA GTTCGACGAG
TCCCGGGCCG ACCTGGCCGC CCTGTCGGTG TTGCTGCGTC AGATCCGAAC CCTGGTACGG
ACCTCGGCGG CATCCTGA
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| Protein sequence | MDRRPATKPG PDLRQVDTGR DDNFDSATDS DGFGDVETGV TGLTGSSIDS IYDLGLPANA
LGEDAEDSDL DEAVPNAERL VAQAIALAAD DHDSASLVRR YWRFAPDEEL IGFTAEEMLD
SVRTHRELAE QRVPGELKLR IHEPDADQHH SVVEIVTDDM PFLVDSVTAL LNSHHLDVHL
LVHPLLVIRR EPLGRLIEVA ADVEPDEVTT GGLIESWMRI EIDPVRDAAD RDNLRRELQR
VLTDVREAVE DWPRMRQQAL TLADELAAAR NSENRPPVPE KDITDSVELL RWLAHDHFTF
LGYREYRLVD AEGETGGKAL RAVLGTGLGI LRSDSTESRA LSSMTPEAHE RVTEKRLLVI
TKANSRATVH RSAYLDYIGF KVFDEAGEVV GERRFIGLFS TAAYRTSVQE LPVVRRKVAE
VVDRCGLSLR SHSGKDLLQI LETYPRDELF QIKTDDLYHA VTGVLRMAGR RQLRVFLRRD
AYGRFISCLI YLPRDRFTTQ NRLRMQDILL RELNGVGVDY TTRVTESMLA RVHFIVRTDP
TKPPEDIDAD LLAEELADAT RLWDDDYRLV LERKLGDEQA KHLFSRYADA FPEGYKDGHT
PYEAMKDLAK LELLEEPGQL EMHLFRKQLA PRATSRVTGD DESMDVRFKV YRYGEPMMLS
AVLPVLHSLG VKAVDEHPYE VERIDGRIWL YDFGLRLPEG HQELAEVRPH VENAFAAAWR
GEAEVDGFNS LVLRAGLTWR QVVVLRAYAK YLRQAGTVFS QDYMESTFIA YPRIAALLVR
LFEARFAPGS TGAEGRQQQS KELVAELRAA LDDVASLDQD RILRSYLTLI QATLRTSFYQ
KRADGRPKPY VALKLDPQAI PDLPAPRPRF EIFVYSPRFE GVHLRFGPVA RGGLRWSDRR
EDFRTEVLGL VKAQMVKNAV IVPVGAKGGF VLKQKPGDRD EAVACYKEFI SALLDATDNI
VSGEIVPPPD VVRHDGDDPY MVVAADKGTA TFSDIANEIS TAHNFWLGDA FASGGSAGYD
HKKMGITARG AWESVKRHFR ELGHDTQTQE FTVVGVGDMS GDVFGNGMLL SRHIRLVAAF
DHRHIFLDPN PDATTSWSER KRLFDLPRSM WDEYNPELIS EGGGVFLRTA KSVPISPQVR
AALGIEDGVS QLSPQELMKA ILTASVDLFW NGGIGTYIKA STQTNVEVGD KSNDAIRVDG
KDLRCRVVGE GGNLGCTQLG RIEYAEAGGR IYTDFIDNAA GVDCSDHEVN IKILLNTAVA
DGELTVGERD ELLAEMTDEV AELVLRDNYD QARAISNAQA QAPSLLPVHR RMIVDLERSG
ALDRALEALP PDEELAVRME SGMTAPEFAV LLSYVKIVLE KEILAEGLAD EEWTTELLVN
YFPTPMRERF ADRMFRHRLR RDIVTTQLVN ETINRGGISF VYRVVEETGA SAADVLRAYV
VVREVFGLRR IWNAVEELDN RVAPDLQTDV YLDFRRLLDR AVRWLVTNRR SPIDVPAEIA
RLRDGVAHLL PQMENLFYGS EREAIAAHIE SMVAKGLPRD LAQQTVRLMY SFGLLDVVET
AASSGRDVSE VASVYFVLSD RFRVDSLLSK ISLLPREDRW QTLARMALRY DLYAALAALT
TEVLGGTPGN LPPVERVQQW EQSNATSIHR AQRAMGEFDE SRADLAALSV LLRQIRTLVR
TSAAS
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