Gene Strop_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3603 
Symbol 
ID5060078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4121261 
End bp4123120 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content71% 
IMG OID640475858 
Producthypothetical protein 
Protein accessionYP_001160412 
Protein GI145596115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.258384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACG TTATGGCAAA GAAGCTGCTC GGGAAGGTCG TGGCAGGTGC GGCCCTCGGT 
GGCGCCTCCC TGCTCGTGTG CGCGCCGGGA ATCGCGGTCG CAGACGATCA CCACCGTGAG
GACGGCGGGA AGGTCAAAGC CAAGCCACAC GCGGTCGAGG CCGGCCACGA GGTCAAGCTG
CTCCAGGTCT GCCCGAAGCC GCAGGAGCAC GCCTACATCT GGTCGAAGGT GACCGGCAAG
GTCAAGCTCA AGCCAGCGCA CGACCGGCGG GACGGCAAGG ACGACCGGGA CAGGGGCGGT
CGCGACCATA AGGACGACTA CGGCTACCAC GGCGACCGCG ACTACGGCTA CCACGGCGAC
CGCGACCACA GCGGCCACGA CTACGGCTAC CACAGCGACC GCGACCACAG CGGCCACGAC
TACGGCTACC ACAGCGACCG CGACCACAGC GGCCACGACT ACGGCTACCA CAGCGACCGC
GACCACAGCG GCCACGACTA CGGCTACCAC AGCGACCGCG ACCACAGCGG CCACGACTAC
GGCTACCACA GCGACCGCGA CCACAGCGGC CACGACTACG GCTACCACAG CGACCGCGAC
CACAGCGGCC ACGACTACGG CTACCACAGC GACCGCGACC ACAGCGGCCA CGACTACGGC
TACCACAGCG ACCGCGACCA CAGCGGCCAC GACTACGGCT ACCACAGCGA CCGCGACCAC
AGCGGCCACG ACTACGGCTA CCACAGCGAC CGCGACCACA GCGGCCACGA CTACGGCTAC
CACAGCGACC GCGACCACAG CGGCCACGAC TACGGCTACC ACAGCGACCG CGACCACAGC
GGCCACGACT ACGGCTACCA CAGCGACCGC GACCACAGCG GCCACGACTA CGGCTACCAC
AGCGACCGCG ACCACAGCGG CCACGACTAC AAAGGCGACT GGGGCTCCGA AGGCCACAGC
GACCGCGACC ACAGCGGCCA CGACTACAAG GGCCACGACT ACAAAGGCGA CTGGGGCTCC
GAAGGCCACA GCGACCGCGA CCACAGCGGC CACGACTACA AAGGCCACGA CTACAAGGGC
GACTGGGGCT CCGAAGGCCA CGGCGACCAC AGCGGCCACG ACTCCGACAG CCGCGACCAC
GATCGCAGCG ACTGGCACGG CAACTCGGGG GAAGGCCAGA CACTTGACCG CCCGACGTCC
TCCGGGCCTG ACCGCGGGGG TCAGGGGGCT GCCGACCACG AGGACCGAAA CGGTTCCGAG
CACGGCCAGG AAGCGGAGGG TGGCCGCAGC GACTGGCACG GCGACGACAA GTCCGACGAC
CGTAGCGACG ACCGGCACGG CGACGACCGC GGCGGCTGGC ACGGCGACGA CCGGCACGGC
GACGACCGCG GCGGCTGGCA CGGCAACGAC CGACACGGCG ACGACCGCGG CGGCTGGCAC
GGCGACGACC GACACGGCGA CGACCGCGGC GGCTGGCACG GCAACGACCG ACACGGCGAC
GACCGCGGCG GCTGGCACGG CGACGACCGA CACGGCGACG ACCGCGGCGG CTGGCACGGC
GACGACCGAC ACGGCGACGA CCGGCACGGC GACGACGGCT GGGAGCACAA GCGGGACTAC
GTCTACTACG GCGAGGCCAA GGTGGACAAG CACGCCAAGC CGGGCACCTA CAAGCTCAAG
GGCTCGTGCG GCGAGGGCGA ACTCGTCGTG CTGCCGCGGG GCGGGGTCGA CGGTGGTGAC
GGCGGCATGA GCGCCGAGGC CAACCGGGGC CTGGCTGCTG GTGGGGCTGG CCTGCTCGGC
GCGGCCGCCC TGGGCGGTCT GGTGCTGCTG CGTCGTCGAA CCGATGGTTC CCTGGTCTGA
 
Protein sequence
MTHVMAKKLL GKVVAGAALG GASLLVCAPG IAVADDHHRE DGGKVKAKPH AVEAGHEVKL 
LQVCPKPQEH AYIWSKVTGK VKLKPAHDRR DGKDDRDRGG RDHKDDYGYH GDRDYGYHGD
RDHSGHDYGY HSDRDHSGHD YGYHSDRDHS GHDYGYHSDR DHSGHDYGYH SDRDHSGHDY
GYHSDRDHSG HDYGYHSDRD HSGHDYGYHS DRDHSGHDYG YHSDRDHSGH DYGYHSDRDH
SGHDYGYHSD RDHSGHDYGY HSDRDHSGHD YGYHSDRDHS GHDYGYHSDR DHSGHDYGYH
SDRDHSGHDY KGDWGSEGHS DRDHSGHDYK GHDYKGDWGS EGHSDRDHSG HDYKGHDYKG
DWGSEGHGDH SGHDSDSRDH DRSDWHGNSG EGQTLDRPTS SGPDRGGQGA ADHEDRNGSE
HGQEAEGGRS DWHGDDKSDD RSDDRHGDDR GGWHGDDRHG DDRGGWHGND RHGDDRGGWH
GDDRHGDDRG GWHGNDRHGD DRGGWHGDDR HGDDRGGWHG DDRHGDDRHG DDGWEHKRDY
VYYGEAKVDK HAKPGTYKLK GSCGEGELVV LPRGGVDGGD GGMSAEANRG LAAGGAGLLG
AAALGGLVLL RRRTDGSLV