Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3595 |
Symbol | |
ID | 5060070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4112340 |
End bp | 4113479 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475850 |
Product | hypothetical protein |
Protein accession | YP_001160404 |
Protein GI | 145596107 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGTG TGAACCTCTG GTTGGATCGG GGAGGAGTCG GCGCGGAGGG CGGTCCGGTG GCGGTGCAGG GTGAGTTCAT CCATCTCGGT TGCTACACGG CTGGTGCCGG GGGGCGCGGC GAGGGGATCG TCGTTGCCCG GCGGGAGCCG GAGTCGGGTG CGCTCACGCC GCTCGGCACG GTCGCGGTCA CCCCGGCGCC GTCGTTCCTC GCCCGGCATC CGGACCTGCC AGTCCTGTAC GCGGTCAACG AGGTGACCGA CGGCGGTGTC AGCGCGTTCC GGATCGCCGC GGACGGGGAT CTCACCACGT TGGGCAGCCG GCCCACCGGT GGCGCCGATC CATGCCATCT CGCGGTCTCC GACGATGGCC GGCACCTCCT CGCGGCCAAC TACGGCGATG GGAGCGTGAC GGTGTTCCCG CTTGACGGGC AGGGGGTGCC CGGGGAGCGC ACCGACCTGG TCCGACACGA GGGCCATGGC GCGGACCCGC AGCGGCAGGA GCGGGCGCAC GCCCACATGG TCGCGCCGGG CCGAAACGGG GGCCCACTGC TCGTGGTCGA CCTCGGCACC GACTCGGTCT ACCGGTACGA GCTCGATGCC GCGACGGGGC GGTTGGTGCC GCGGGCTCCA CGAGTGCGCA CCGCCGCTGG TGTCGGGCCA CGGCATCTTG CCCGTCACCC AGACGGGCGG CGTTGCTGGC TGGTCGGGGA GTTGGATGGC TCGGTTCTGG CCTATGAGAT CACCACGGCG GCTTCCCTGC GTTTGAGCGG CCGGGTTTCG GCCAGCGGGC GCCCGGGGCA GGTGCAGCCT TCGGAGGTCG CGGTCGGGCC GGAGGGGAGG TTCCTCTATG TCGCGAACCG GGGTGTCGGC ACGATCGCCG TCTTCGCGCT CGACGGCGAG TTGCCGGTGC TGGTCGCCGA GGTTGACTCC GGTGGGGAGT GGCCCCGGCA CTTCGCGCGG GTCGGTGCCA ACCTGTATGT CGCGGACGAG CGGGCCGACC TGATTAGCGT GTTCCGGGTC GACCCGACGA CCGGCGTGCC GGCGCCGGTC GATGAGCCGG TAGGTGTTCC GAGTCCCACC TGTGTCCTGC CCTGGACAGG AGATCGGAGC GTATCGGGTT TTCGCGCTCA CGTAGCGTAG
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Protein sequence | MAGVNLWLDR GGVGAEGGPV AVQGEFIHLG CYTAGAGGRG EGIVVARREP ESGALTPLGT VAVTPAPSFL ARHPDLPVLY AVNEVTDGGV SAFRIAADGD LTTLGSRPTG GADPCHLAVS DDGRHLLAAN YGDGSVTVFP LDGQGVPGER TDLVRHEGHG ADPQRQERAH AHMVAPGRNG GPLLVVDLGT DSVYRYELDA ATGRLVPRAP RVRTAAGVGP RHLARHPDGR RCWLVGELDG SVLAYEITTA ASLRLSGRVS ASGRPGQVQP SEVAVGPEGR FLYVANRGVG TIAVFALDGE LPVLVAEVDS GGEWPRHFAR VGANLYVADE RADLISVFRV DPTTGVPAPV DEPVGVPSPT CVLPWTGDRS VSGFRAHVA
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