Gene Strop_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3595 
Symbol 
ID5060070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4112340 
End bp4113479 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content72% 
IMG OID640475850 
Producthypothetical protein 
Protein accessionYP_001160404 
Protein GI145596107 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTG TGAACCTCTG GTTGGATCGG GGAGGAGTCG GCGCGGAGGG CGGTCCGGTG 
GCGGTGCAGG GTGAGTTCAT CCATCTCGGT TGCTACACGG CTGGTGCCGG GGGGCGCGGC
GAGGGGATCG TCGTTGCCCG GCGGGAGCCG GAGTCGGGTG CGCTCACGCC GCTCGGCACG
GTCGCGGTCA CCCCGGCGCC GTCGTTCCTC GCCCGGCATC CGGACCTGCC AGTCCTGTAC
GCGGTCAACG AGGTGACCGA CGGCGGTGTC AGCGCGTTCC GGATCGCCGC GGACGGGGAT
CTCACCACGT TGGGCAGCCG GCCCACCGGT GGCGCCGATC CATGCCATCT CGCGGTCTCC
GACGATGGCC GGCACCTCCT CGCGGCCAAC TACGGCGATG GGAGCGTGAC GGTGTTCCCG
CTTGACGGGC AGGGGGTGCC CGGGGAGCGC ACCGACCTGG TCCGACACGA GGGCCATGGC
GCGGACCCGC AGCGGCAGGA GCGGGCGCAC GCCCACATGG TCGCGCCGGG CCGAAACGGG
GGCCCACTGC TCGTGGTCGA CCTCGGCACC GACTCGGTCT ACCGGTACGA GCTCGATGCC
GCGACGGGGC GGTTGGTGCC GCGGGCTCCA CGAGTGCGCA CCGCCGCTGG TGTCGGGCCA
CGGCATCTTG CCCGTCACCC AGACGGGCGG CGTTGCTGGC TGGTCGGGGA GTTGGATGGC
TCGGTTCTGG CCTATGAGAT CACCACGGCG GCTTCCCTGC GTTTGAGCGG CCGGGTTTCG
GCCAGCGGGC GCCCGGGGCA GGTGCAGCCT TCGGAGGTCG CGGTCGGGCC GGAGGGGAGG
TTCCTCTATG TCGCGAACCG GGGTGTCGGC ACGATCGCCG TCTTCGCGCT CGACGGCGAG
TTGCCGGTGC TGGTCGCCGA GGTTGACTCC GGTGGGGAGT GGCCCCGGCA CTTCGCGCGG
GTCGGTGCCA ACCTGTATGT CGCGGACGAG CGGGCCGACC TGATTAGCGT GTTCCGGGTC
GACCCGACGA CCGGCGTGCC GGCGCCGGTC GATGAGCCGG TAGGTGTTCC GAGTCCCACC
TGTGTCCTGC CCTGGACAGG AGATCGGAGC GTATCGGGTT TTCGCGCTCA CGTAGCGTAG
 
Protein sequence
MAGVNLWLDR GGVGAEGGPV AVQGEFIHLG CYTAGAGGRG EGIVVARREP ESGALTPLGT 
VAVTPAPSFL ARHPDLPVLY AVNEVTDGGV SAFRIAADGD LTTLGSRPTG GADPCHLAVS
DDGRHLLAAN YGDGSVTVFP LDGQGVPGER TDLVRHEGHG ADPQRQERAH AHMVAPGRNG
GPLLVVDLGT DSVYRYELDA ATGRLVPRAP RVRTAAGVGP RHLARHPDGR RCWLVGELDG
SVLAYEITTA ASLRLSGRVS ASGRPGQVQP SEVAVGPEGR FLYVANRGVG TIAVFALDGE
LPVLVAEVDS GGEWPRHFAR VGANLYVADE RADLISVFRV DPTTGVPAPV DEPVGVPSPT
CVLPWTGDRS VSGFRAHVA