| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3592 |
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| Symbol | |
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| ID | 5060067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4107519 |
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| End bp | 4108706 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475847 |
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| Product | xylose isomerase |
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| Protein accession | YP_001160401 |
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| Protein GI | 145596104 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.239598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.862129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCCC GTCCCACCCC TGCTGACAAG TTCTCCTTCG GCCTCTGGAC GGTGGGCTGG
CAGGCCCGGG ACCCGTTCGG CGACGCCACC CGACCGCCGC TGGACGCGGT CGAGGCGGTG
CACCGCCTTG CCGACCTGGG GGCGTACGGC ATCACCTTTC ACGATGATGA TCTGATCCCC
TTCGAGGCGG ACGCTGCCGT CCGCGATGCC CACCTCACCC GGTTCCGTCG GGCCCTCGAC
GAGACCGGCC TGGTGGTCCC GATGGTCACC ACCAACCTCT TCACCCATCC CGTGTTCAAG
GACGGCGGCT TCACCAGCAA CGACCGGGAC GTCCGGCGGT ACGCGCTCCG CAAGGCGCTG
CGTGCCGTGG ACCTCGCCGC CCAGCTGGGC GCGCGCACCT TCGTCCTGTG GGGTGGTCGG
GAGGGTGCCG AGTACGACGT CGCCAAGGAT GTCCGCGCCG CCCTGGACCG CTACCGCGAG
GCGGTTGACC TGCTCTGCCA GTACGTCGTG GCGCAGGGAT ACGAGCTGCG GTTCGCGATC
GAGCCCAAGC CCAACGAGCC GCGCGGCGAC ATTCTGCTGC CCACCGTCGG GCACGCGCTC
GCCTTCATCG CCACCCTGGC CCGCCCGGAG CTGGTCGGTC TCAACCCGGA GGTCGGCCAT
GAGCAGATGG CCGGGCTCAA CGTCGCCCAC GGCATTGCTC AGGCGCTCTG GCAGGGCAAG
CTGTTTCACC TCGACCTCAA CGGCCAGCGT GGGGTCAAGT ACGACCAGGA CCTGGTCTTC
GGCCATGGTG ACCTGCTTAA CGCCTTCGCA CTGGTCGACC TACTCGAGAA CGGTGGTCCA
GGCGGCGGGC CGGCGTATGA CGGTCCCCGG CACTTCGACT ACAAACCGTC TCGTACCGAG
GACCGGACCG GGGTGTGGGC CTCGGCCGAG GCAAACATGC GCACCTACCT GCTCCTCAAG
GAGCGGGCCG CGGTGTTCCG GGCCGATCCG GAGGTCACCG CGGCGCTGGC CACGAGCCGG
GTGGGTGAGC TGGCAACGCC AACCCTCGCC CCCGGCGAGA CCCACGCCGG TCTCCGCGCC
GATCGCACTG CCTTCGAGGA GTACGACGTG ACCGCTGCCG GCGCTCGCGG CTACCACTTC
GTTCGGCTCA ACCAACTCGC CGTCGAGCAT CTGCTCGGTG CGCGCTGA
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| Protein sequence | MAPRPTPADK FSFGLWTVGW QARDPFGDAT RPPLDAVEAV HRLADLGAYG ITFHDDDLIP
FEADAAVRDA HLTRFRRALD ETGLVVPMVT TNLFTHPVFK DGGFTSNDRD VRRYALRKAL
RAVDLAAQLG ARTFVLWGGR EGAEYDVAKD VRAALDRYRE AVDLLCQYVV AQGYELRFAI
EPKPNEPRGD ILLPTVGHAL AFIATLARPE LVGLNPEVGH EQMAGLNVAH GIAQALWQGK
LFHLDLNGQR GVKYDQDLVF GHGDLLNAFA LVDLLENGGP GGGPAYDGPR HFDYKPSRTE
DRTGVWASAE ANMRTYLLLK ERAAVFRADP EVTAALATSR VGELATPTLA PGETHAGLRA
DRTAFEEYDV TAAGARGYHF VRLNQLAVEH LLGAR
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