Gene Strop_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3565 
Symbol 
ID5060040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4084959 
End bp4085375 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID640475820 
ProductCBS domain-containing protein 
Protein accessionYP_001160374 
Protein GI145596077 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG TCGGAGAGTT CATGACGACC CGGTTGGTGA CGATGGATGG CAACGACACG 
CTCATCGCGG CCGCCCAGGA GATGCGGGAC TGCGCGATTG GGGATGTCGT GGTAACGGAC
GGTGAAAACG TCGTTGGTAT CGTGACAGAC CGTGACATTG CCGTCCGGGC GGTGGCGGAG
AACATGAACC CAGCCTCGAC CCGGTTGAAC GAGATCACCA CCCGGGATGT GATCACGGTC
AGCCAGTACG ACGACGCCGT CGCCGCCGCC GACCTGATGC GGACGTACGC GGTGCGCCGC
CTGCCGGTGG TCGAGGACGG GCAGCTGATC GGCCTGGTCT CGATGGGGGA CCTGGCAGTG
GAGCGCGAAC CGCAGTCGGT ACTCGCGGAC ATCAGCGCGG ACGACCCGAA CAACTAG
 
Protein sequence
MTTVGEFMTT RLVTMDGNDT LIAAAQEMRD CAIGDVVVTD GENVVGIVTD RDIAVRAVAE 
NMNPASTRLN EITTRDVITV SQYDDAVAAA DLMRTYAVRR LPVVEDGQLI GLVSMGDLAV
EREPQSVLAD ISADDPNN