Gene Strop_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3562 
Symbol 
ID5060037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4081558 
End bp4082286 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID640475817 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001160371 
Protein GI145596074 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC TCGTGTATCC GCCCGTGATC GCCGCCGCTA AGACGATGTT CCGGGTCCTC 
GACCTGAAGA TCACCATTGA GGGCGCCCAC CACGTTCCAC GTACCGGTGG CGCTGTCCTC
GCCAGCAACC ACGTCAGCTA CCTCGACTTC ATCTTCTGCG GCCTGGGTGC GCGGGAGTCG
AAGCGGTTGG TCCGGTTCAT GGCCAAGAAG TCCGTGTTCA CGCACCGGAT CTCCGGGCCA
CTGATGCGGG GGATGCGGCA CATCCCGGTC GACCGCCGGT CCGGAACCGG CTCCTACGTC
GAGGCAGTCA CCGCGCTGCG GCAGGGCGAG GTGGTCGGCG TCTTCCCCGA GGCGACGATC
AGCCGTTCCT TCACCGTCAA GCATCTCAAG AGCGGCGCAA CCCGGATGGC CCGGGAAGCC
AACGTGCCGG TGCTGCCGAT GGCGGTCTGG GGAACCCAGC GGCTGTGGAC CAAGGGGCGG
CCACGCACCC TCAACCGGCG GCACACCCCG ATCACCATCC TGATCGGAGA GCCGATGGAT
CCGGCTGCCT ACCCGGACGC AAACGCAATG ACCGCCGACC TGGCCGAGCG GCTGAGCGCC
CTGGTTGACC GGAACCAACG CGAGTACCCG GAGAACCCGG CCGGCCCCGA CGACACCTGG
TGGCTCCCGG CGCACCTGGG CGGCAGCGCA CCCACCCCCG CCGAGGCGGT CACCCTGGAT
CGCTCCTGA
 
Protein sequence
MPELVYPPVI AAAKTMFRVL DLKITIEGAH HVPRTGGAVL ASNHVSYLDF IFCGLGARES 
KRLVRFMAKK SVFTHRISGP LMRGMRHIPV DRRSGTGSYV EAVTALRQGE VVGVFPEATI
SRSFTVKHLK SGATRMAREA NVPVLPMAVW GTQRLWTKGR PRTLNRRHTP ITILIGEPMD
PAAYPDANAM TADLAERLSA LVDRNQREYP ENPAGPDDTW WLPAHLGGSA PTPAEAVTLD
RS