Gene Strop_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3556 
Symbol 
ID5060030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4076347 
End bp4077039 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID640475810 
Productsingle-strand binding protein 
Protein accessionYP_001160365 
Protein GI145596068 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA CGCACGTCAC GGTGATCGGC ACCGCCGTGA CCGCCCCCGA GTGGCGGCGC 
ACCACCCAGA GCCAGACCCT GGTGGCCAAC TTCAAGGTGG CCTCCACCGC ACGTCGCCTC
GACCGCGAGA GCGGTCGCTG GGTCGATGGC AACAGCCTTC GCCTGCGGGT CAACTGCTGG
CGTCGGCTCG CCGAGGGGGT CGCGGCGTCG GTGATGGTCG GCGACCCAGT GATCGTGTCC
GGGCGCCTCT ACACCCGGGA CTGGACCGAC GATGCCGGTA GCCACCGAAC CCACTACGAA
CTGGAGGCCG TCGCGGTCGG CCACGACCTG TCCCGCGGCC GAGGTCGGTT TCTGCGAAAC
CGGCCGGCGA CCACGACCAG TAACACGGCG GATCCCACAG CGGATCCGCG GGTGCCCGGT
GAGCAGACCG AGTCGGCGTT GTCCGCCCCC GCCGACCGGC AGGTCGACGA GGAAGTCGAG
CTGGCCGCAC CCCACGACCA CCCGACCGCT GCCGGTGCCG ACGTGGACCC CCTGGACGAT
CCGACCGCTG AGGCGGACCG GGGCGACGCT GCTTCTGGTC AAACCGACGG GTTCGTCTCC
GCCGGGAGTC CGGGTGGGCC AGCGGAGCCG ACCGATGGGG CCAGCCGAGC CGATGCGGCC
GGCCAGAGGC GCCGAGCCGG CACCCGGCGG TAG
 
Protein sequence
MFDTHVTVIG TAVTAPEWRR TTQSQTLVAN FKVASTARRL DRESGRWVDG NSLRLRVNCW 
RRLAEGVAAS VMVGDPVIVS GRLYTRDWTD DAGSHRTHYE LEAVAVGHDL SRGRGRFLRN
RPATTTSNTA DPTADPRVPG EQTESALSAP ADRQVDEEVE LAAPHDHPTA AGADVDPLDD
PTAEADRGDA ASGQTDGFVS AGSPGGPAEP TDGASRADAA GQRRRAGTRR