Gene Strop_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3552 
Symbol 
ID5060026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4072222 
End bp4072887 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content74% 
IMG OID640475806 
Producthypothetical protein 
Protein accessionYP_001160361 
Protein GI145596064 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCGT ACGCCCTGCT GGCAGAGCGG GTGTGTGCGG CGCCAGCGCG GTTGGGGAAG 
ACCCGGCTGG TGGCTGTGGA CGGACCGAGC GGCGCGGGCA AGAGCTGGTT CACGGCGCGG
CTCGCCGATG CTCTCGCGGC CGGGCCCGGC TGTCCCCGCC CCGTGGTGAT ACACACCGAC
GACCTGCTCG ACGGCTGGGC CGACCAACTC ACCTTCTGGC CCCGGCTGGA GGAGTGGGTG
CTGGCGCCGG TGCGGGCGGG GCGGGCTGGG GAGTACCGGC GGTACAGCTG GGTCCGGCGA
TCGTTCCTGC CCCGCCCGGT GCCGGTGCCG GTGTCACCGG TGCTGCTGCT GGAGGGGGTG
AGCGCGGCGC GTGCCGCGGC GGCGCCGGAG TTGAGCCTCG CCGTGTTCGT GACCGCCCCG
GCGCAGCTGC GGCTCACCCG GGCGGTGGCC CGGGACGGCC CGGGGATCCT GCCGGAGCTG
CGCCGCTGGC ATGCGGGCGA GCGGGCTCAC TTCGCCACCG ACGGCACCCG GGACCGGGCG
GACCTGGTGG TCGACGGCGC GCCGGTACTG CCCCACGACC GGACCCGGTA CTACCTGCGG
CGCGGTGGAT CGGTAAGGCC GGCATACGAT GCCGGCCATG ACAACATCGA TCATGTCCGA
GTCTGA
 
Protein sequence
MESYALLAER VCAAPARLGK TRLVAVDGPS GAGKSWFTAR LADALAAGPG CPRPVVIHTD 
DLLDGWADQL TFWPRLEEWV LAPVRAGRAG EYRRYSWVRR SFLPRPVPVP VSPVLLLEGV
SAARAAAAPE LSLAVFVTAP AQLRLTRAVA RDGPGILPEL RRWHAGERAH FATDGTRDRA
DLVVDGAPVL PHDRTRYYLR RGGSVRPAYD AGHDNIDHVR V