| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3546 |
|---|
| Symbol | |
|---|
| ID | 5060020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4065085 |
|---|
| End bp | 4066179 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640475800 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001160355 |
|---|
| Protein GI | 145596058 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTGG AGAGGACGAC AGCGGCGATC GGACCGCTCG ACGAGCAGGC GATGGCTACC
GCCGCAGACC TGCAGAGTCG GCTGACCAAA CCCGCGGGCT CCCTCGGTGT GCTGGAAGAG
CTCTCCGTTC GTCTCGCCGG CCTGGCCGGC GTCTGCCCGC CGCCGCTGCC CGAGCCGGCC
GCGGTGGCCG TCTTCGCCGG AGACCATGGT GTGCACGCCC AGGGCGTGAC GCCCTGGCCG
CAGGAGGTCA CCGGTCAGAT GATCGGCAAC TTCCTCGCCG GCGGGGCGGT GGTCAACGCG
TTCGCCCGGC AGACCGGGGC CACGGTGACC GTCGTGGACG TCGGGGTCGC CGCACCGCCA
ACGTCCATCG AGACCGCGCC GCCCGAGTCG GCCACGGCCA GCGGTGCCAG ACCCCGGCTG
GTCGAGGCGA ACATCCGACG CGGCACCCGG GATCTGACCG TCACCGCCGC CCTCACCCGG
GACGAGGCCC GGGCCGCGGT GGAGACAGGT ATTCGGGTCG CCGACGAACT CGTCGATGCC
GGGGCCGCCA TCCTGCTCAC CGGGGATATG GGTATCGGCA ACACCACACC GGCCGCCGCG
CTGATCGCGG TCTTCGCCGA GGCTGACCCC GCCACGGTGA CCGGCCGGGG CACCGGAGTG
GACGATCCGA CACACCAGCG CAAGATCGAG GTGGTCCGGG CGGCGCTGCG CCGGCACGAG
CCGGACCCGG CGGACCCGCT GGGCGTGCTG GCGGCCGTCG GTGGCCTGGA GCACGCGGCC
CTGGCCGGGC TGATCCTGGG CGCCGCCGCC CAACGGGTGC CGGTGCTGCT CGACGGCGTC
ATCGCCGACT CGGCTGCGCT GGCCGCCGCG GCATTCGCCC CGTCTGCCAC CGGCGCGATG
GTGGCAGGCC ACCGGTCGGT CGAGCCGGGA GCCACGGTGG CGCTGCGCCG ACTGGGGTTG
ACCCCTCTGG TCGACCTTGG GTTGCGCCTC GGTGAGGGCA CCGGGGCGCT GCTGGCCCTG
CCGGTGGTCG CGGGGGCCGT CCGAGTGCTG CACGAGGTCG CCACCTTCGA CTCGGCAGGG
GTGGCGCAGA AGTGA
|
|---|
| Protein sequence | MMLERTTAAI GPLDEQAMAT AADLQSRLTK PAGSLGVLEE LSVRLAGLAG VCPPPLPEPA
AVAVFAGDHG VHAQGVTPWP QEVTGQMIGN FLAGGAVVNA FARQTGATVT VVDVGVAAPP
TSIETAPPES ATASGARPRL VEANIRRGTR DLTVTAALTR DEARAAVETG IRVADELVDA
GAAILLTGDM GIGNTTPAAA LIAVFAEADP ATVTGRGTGV DDPTHQRKIE VVRAALRRHE
PDPADPLGVL AAVGGLEHAA LAGLILGAAA QRVPVLLDGV IADSAALAAA AFAPSATGAM
VAGHRSVEPG ATVALRRLGL TPLVDLGLRL GEGTGALLAL PVVAGAVRVL HEVATFDSAG
VAQK
|
|---|
| |