| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3544 |
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| Symbol | |
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| ID | 5060018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4061097 |
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| End bp | 4063700 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475798 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001160353 |
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| Protein GI | 145596056 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase
[COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG GCACCACACT CGGCAACCCG GTCGGTGGCG GCCTGGAGCA GGAGCTACGC
ACGGCGATCG GCCGGATCGC CCGTGTCCCC CAACTGCTGA TCGCCTGTGA CTACGACGGC
ACCCTCGCCC CGATCGTCGA GGACCCGAGC CGGGCCATAC CGCTGCCGGA GGCGGCGGCC
GCGGTGCGTG CGCTCGCCTC GCTACCGCAG ACCAACGTGG CGGTCGTCTC CGGACGGGCG
CTGCGTGACC TGGCCGCCCT GTCCCGGCTG CCCAGCGAGG TCCATCTCGT CGGCAGTCAC
GGCTCCGAGT TCGACATCGG CTTCGTCGAA CGGCTCTCCC CCGAGCTGGT CGCCGTCCGC
ACCCGGCTCC GCGACGCGCT GCACGAGATC GTCGCCGCCC ACCCCGGGGT TCGGCTGGAG
CGCAAGCCGG CCAGTGTCGC CGTGCACACC CGTGGACTCG ACCCGCAGGT CGCCGCCGCA
GCCGTCGAGG CGGTCCGCAA CGGCCCCGCG ACCTGGGACG ACGTCACTGT CACCCAGGGC
AAGGAGGTCA TCGAGCTGTC GGTGGTCGCC ACCCACAAGG GCACCGCCGT TGACCAGCTA
CGGACCCAGC TCTCGGCCAG CGCGGTGCTC TTCATCGGCG ATGACGTCAC CGACGAGAAC
GCCTTCGGCA ACCTGCACGG GCCAGATCTC GGCATCAAGA TCGGGCCCGG CGACACCAGG
GCGCAGTACC GGGTAGCCGA GCCGATCGAA GCCGCCCGCG CCCTCGGACT ACTACTGGAG
ACCCGACGGA ACTGGCTCTT CGGCGAGCGG GCGGTGCCGA TCGAGCGGCA CTCGATGTTG
GCCAACGGCC GGACGGTCGC GCTCCTCACC CCCGAAGCCA AGGTCACCTG GCTGTGCAAC
CCGAAGCCCG ACTCCGCCGC GATCTTCGCC GACCTGGTCG GCGGCAGCCC CGCCGGCTAC
TTCAGCGTCA TGCCGGAGCG CGGTGGCATC CCGCTCGGCC AGCGCTACCG CTCCAACACG
ATGACCGTGG AGACCCGGTG GTCCGGCCTG ACCGTGACCG ACTGGCTGGA CACCCCGGAC
ACCGAGACCA CACCGGATGG GCCGGCGATC GTCAGCGCCG ACTCGACCCT GGTCCGAGTG
CTCACCGGAC ACGGCCGAGC ACAGCTGGAA TTCGCCCCCC GGCCCGAGTT CGGCCAGGTC
GCCGTCCAGC TCCAACCGCT CGATGACGGG CTGCTGGTGC TCGGCTCAAA CGACCCGGTC
GCGCTCTACT CCCCCGGCGT GACGTGGGAG GTGGTCGGCG ACGGAGTGTT CGAGACGGCG
AAGGCCGTCG TTGACCTCTC CGCCGCCAAC GAGCCGGTCG TGCTGGAGAT GCGCTTCGGC
ACCCACAGCC TGGAACACCA CCGGCAGTCG ATTCAGGAAC GACAGGCCAC GGCGGAGCAA
CCCTGGAAGG ACTGGGTGGC CACGCTGCGG CTGCCGGCCA CCGGCCGGGA CCTGGTCGCC
CGCAGCGCGC TCACCCTCCG CGGGTTGTGC CACCAACCGA GCGGTTCGAT CCTGGCCGCC
GCGACCACCT CCCTCCCCGA AGAGCTGGGC GGCGTCCGCA ACTGGGACTA CCGCTACTGC
TGGCTCCGCG ACGCGGCGCT GACCGCCCGG GCTCTGGTCG ACCTCGGCTC CACCGATGAG
GCCGAGGCGC TGCTGCGCTG GATCGACGGG GTCGTCGACC GCACCGGTGG GCACCCCGAA
CGGCTACACC CGCTCTACAC GGTTGACGGT TACGAGTTGG GCGCCGAGGC CGTCATCGAC
ACCTTGCCCG GCTACGCCGG CTCCCGGCCC GTCCGGGTCG GCAACCTCGC CAACCACCAG
CTCCAACTCG ACGTCTTCGG TCCGATCGCC GACCTGATCG CGGCCGTGGC CGACGCTCGC
AGCTCCGTCC GGGACGACGA GTGGCGGGTC CTGGAGAACA TGGTGGAGGC GGTCCGCCGC
CGCTGGCACG AACCGGACCA TGGCATCTGG GAGGCGCGCC TGGCGCCCCG ACACCACATC
TTCTCGAAGG TGATGTGCTG GCTGACCGTC GACCGGGCGC TGCACGTGGT ACGCAAGCAC
GGCGGCGAGG AGCGGCCCGA GTGGGTGGAG CTACGCGACC GAATCGGTGC CAACGTGCTC
GAGTTCGGCT GGCACGAGCA GGCCGAGGCG TACAGCGTCG CGTACGGGCA CGAGGACAGT
GACGCCTCCT CGCTCTGGAT CGGCCTGTCC GGCCTGCTCC CCGGGGACGA CCCACGCTTC
GTCTCCACCG TCCTCAAGAT CGAGGCAGAT CTTCGCAGTG GCCCGGTGGT CTACCGCTAC
CACTGGGAGG ACGGCCTACC CGGCCGGGAG GGTGGCTTCC ACATCTGCAC CTCGTGGTTG
ATCGAGGCGT ACCTGCGCAC GGGCCGCCGC GGCGACGCGG AGGAGCTGTT CACCCAAATG
ATCGACACCG CCGGACCGAC CGGGCTGCTG CCCGAGCAGT ACGACCCGCT GACCGAACGC
GGGCTGGGCA ACCATCCACA GGCCTACAGC CACCTCGGCG TGATCCGCTG CGCCCTCCTG
TTGGACAACA TGCTCAAGCA GTAG
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| Protein sequence | MSTGTTLGNP VGGGLEQELR TAIGRIARVP QLLIACDYDG TLAPIVEDPS RAIPLPEAAA
AVRALASLPQ TNVAVVSGRA LRDLAALSRL PSEVHLVGSH GSEFDIGFVE RLSPELVAVR
TRLRDALHEI VAAHPGVRLE RKPASVAVHT RGLDPQVAAA AVEAVRNGPA TWDDVTVTQG
KEVIELSVVA THKGTAVDQL RTQLSASAVL FIGDDVTDEN AFGNLHGPDL GIKIGPGDTR
AQYRVAEPIE AARALGLLLE TRRNWLFGER AVPIERHSML ANGRTVALLT PEAKVTWLCN
PKPDSAAIFA DLVGGSPAGY FSVMPERGGI PLGQRYRSNT MTVETRWSGL TVTDWLDTPD
TETTPDGPAI VSADSTLVRV LTGHGRAQLE FAPRPEFGQV AVQLQPLDDG LLVLGSNDPV
ALYSPGVTWE VVGDGVFETA KAVVDLSAAN EPVVLEMRFG THSLEHHRQS IQERQATAEQ
PWKDWVATLR LPATGRDLVA RSALTLRGLC HQPSGSILAA ATTSLPEELG GVRNWDYRYC
WLRDAALTAR ALVDLGSTDE AEALLRWIDG VVDRTGGHPE RLHPLYTVDG YELGAEAVID
TLPGYAGSRP VRVGNLANHQ LQLDVFGPIA DLIAAVADAR SSVRDDEWRV LENMVEAVRR
RWHEPDHGIW EARLAPRHHI FSKVMCWLTV DRALHVVRKH GGEERPEWVE LRDRIGANVL
EFGWHEQAEA YSVAYGHEDS DASSLWIGLS GLLPGDDPRF VSTVLKIEAD LRSGPVVYRY
HWEDGLPGRE GGFHICTSWL IEAYLRTGRR GDAEELFTQM IDTAGPTGLL PEQYDPLTER
GLGNHPQAYS HLGVIRCALL LDNMLKQ
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