| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3543 |
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| Symbol | |
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| ID | 5060017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4059433 |
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| End bp | 4061100 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475797 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001160352 |
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| Protein GI | 145596055 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGAGCC GGGGTCGCCC ATCGGCGGGC CGATCGCGCC GGCCCACCGT CAATCCTGAC
AGGTCACCCC GGCTACGCCT ACATCACCCC GCCGGACCGG CGGCTCGGCA CAGCCGCTCG
GCAGACCCAC AGAATGTCAG CAAGATCACT TTTGGGGTTC GGTGCCGCCA AGCGGGTGGG
CCAAGTCCGG CACGGTACAC CAGACGCCGC AGCTACGCTC AGTACGCTCG TCGCGGTGGA
TTCGTCAGCA CCCGGAGGTG GCCCAACGTG ACCGTCCGCA GCTCCTTTGT CGTAGTGGCC
AATCGACTGC CCGTTGACGA GGTGAGCACA CCCGAGGGAC GGCAGTGGCG CCGCAGCCCG
GGTGGGCTCG TGACCGCACT GCATCCTGTC CTCGCCGAGC ACCATGGCAC CTGGGTCGGC
TGGGCCGGCG GTAAGGGGGC CGCGCCGGAG CCGTTCGACC TGGAGGGCAT CCGGCTACAT
CCGGTGCCGT TGAGCACGGA CGAGTTGGAG CGCTACTACG AGGGGCAGTC CAACGCGATG
ATCTGGCCGC TGTATCACGA CGCGGTCGAA ACCCCGGTGT ACAAGCGCCG TTGGCGGGAG
ACGTACCGGC TGGTGAACGC CCGGTTCGCG GAGGCGGCAT CGGATGTCGC GGCGGAGGGC
GCCACGGTCT GGGTGCAGGA CTACCAACTC CAGCTGGTGC CGGCGATGCT CCGCGAGCTC
CGCCCCGACC TACGGATCGG CTTCTTCCTG CACATCCCGT TCCCGCCGAT CGAGTTGTTC
ATGCAGATGC CGTTCCGCAC CGAGATCCTC CGCGGGCTCC TCGGCTCCGA CCTGGTGGGC
TTCCAGCAGC GGCTCGCGGC GCAGAACTTC GTCCGGTTGG CCCGGCACCT GCTCGGGCTG
CGCTACGAGG GGCAGATGAT CCAGGTCGAC GGCCGTCGGG TGAAGGCGGG CGCGTTCCCC
ATCTCCATCG ACACGCAGGA GATGGAGCGA CTGGCGGTGG ATCCGGCGAT CCGGGCGCGG
GCGGAGGAGA TCCGCGAGGA ACTGGGGAAC CCGCGCACGA TCATCCTGGG GGTCGACCGA
CTCGACTACA CCAAGGGCAT CGAGTTGCGA CTCAAGGCCT TCCGCGAGCT GCTCTCTGAC
GGAAAGTTGA CAGTTCCGGA CGCGGTTATG GTGCAGGTGG CGACGCCGAG CCGGGAACGG
GTGGAGCACT ACCAGGCACT TCGCGTCAAG GTGGAGCGCG AGGTTGGTCG GATAAATGGC
GAATTTGGCC GGGTTGGGGT ACCGGCGGTG CATTATCTGC ATCAGTCGTA CAGTCGCACC
GAGCTGGCCG CGATGTACGT CGCCGCCGAC GTGATGATGG TGACCCCGCT GCGAGACGGA
ATGAATCTGG TGGCCAAGGA GTACGTTGCA GCGCGCGCCG ACCGGGGTGG CGCGCTCGTG
CTGAGTGAAT TCGCTGGCGC GGCCACCGAG CTGCGCCAAT CGTTCCTGTG TAACCCGCAC
GACCCGGACG CGGTCAAGGA GGCCCTGCTA CGGGCCGTGC ACGTGGAGAA GCCGGAGGCC
CGTCGCCGCA TGCGGACAAT GCAACGTCAT CTGCGCACCC ACGACGTGGG GCACTGGGCG
AAGTCCTTCC TCACCGAACT TGGCGTGCCG GGACCGGATG CCTCGTGA
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| Protein sequence | MRSRGRPSAG RSRRPTVNPD RSPRLRLHHP AGPAARHSRS ADPQNVSKIT FGVRCRQAGG
PSPARYTRRR SYAQYARRGG FVSTRRWPNV TVRSSFVVVA NRLPVDEVST PEGRQWRRSP
GGLVTALHPV LAEHHGTWVG WAGGKGAAPE PFDLEGIRLH PVPLSTDELE RYYEGQSNAM
IWPLYHDAVE TPVYKRRWRE TYRLVNARFA EAASDVAAEG ATVWVQDYQL QLVPAMLREL
RPDLRIGFFL HIPFPPIELF MQMPFRTEIL RGLLGSDLVG FQQRLAAQNF VRLARHLLGL
RYEGQMIQVD GRRVKAGAFP ISIDTQEMER LAVDPAIRAR AEEIREELGN PRTIILGVDR
LDYTKGIELR LKAFRELLSD GKLTVPDAVM VQVATPSRER VEHYQALRVK VEREVGRING
EFGRVGVPAV HYLHQSYSRT ELAAMYVAAD VMMVTPLRDG MNLVAKEYVA ARADRGGALV
LSEFAGAATE LRQSFLCNPH DPDAVKEALL RAVHVEKPEA RRRMRTMQRH LRTHDVGHWA
KSFLTELGVP GPDAS
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