Gene Strop_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3538 
Symbol 
ID5060012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4055365 
End bp4055793 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID640475792 
Productglobin 
Protein accessionYP_001160347 
Protein GI145596050 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.637564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCCCG CAGGTGAATC CGGCAACCCC GGCCCATCAA CGAGTTTCTT CGATGCGGTT 
GGCGGCGAGC CCACCTTCCG TAAGCTGGTG GACGAGTTCT ATGCGGGCGT CGCCGACGAC
CCGCTGCTGC GTCCGATGTA TCCAGAGGAG GATCTGGGGC CCGCAGCGGA GCGGCTCACC
CTGTTCCTGA TGCAGTACTG GGGTGGGCCG AACACCTACT CCGCCCAGCG GGGGCACCCG
CGACTACGGA TGCGGCACGC ACCGTTTCGG ATCGGGGCGG CGGAACGGGA CGCCTGGCTG
CGGCACATGC GCCAGGCGGT GGACCGGCTG GACCTGCCGC CGGAGCTCGC CACCGCTCTC
TGGGACTACC TGGAGCGGGC CGCGTACTTC ATGGTGAACG CACTGGAGGA CCCGGCCGCG
CCGGCGTGA
 
Protein sequence
MHPAGESGNP GPSTSFFDAV GGEPTFRKLV DEFYAGVADD PLLRPMYPEE DLGPAAERLT 
LFLMQYWGGP NTYSAQRGHP RLRMRHAPFR IGAAERDAWL RHMRQAVDRL DLPPELATAL
WDYLERAAYF MVNALEDPAA PA