| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3528 |
|---|
| Symbol | |
|---|
| ID | 5060002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4044681 |
|---|
| End bp | 4046186 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475782 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001160337 |
|---|
| Protein GI | 145596040 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03216] 2-hydroxymuconic semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.757321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGT GGGATGCGCG CCAGATGCAG GGCCAGGCGC CGGGCGGGAC GGCCCTGCTG
CCCAACTTCA TCGCTGGCGA GTTCGTCGAC TCGGGTCGCC GTTTCACCAA GCACAGCCCG
GTTACCGGGG AGCCGCTCTT CGAGGTCGTC GAGGCGGATC AGGCCGGAGT GGACGACGCG
GTGGCCGCCG CGCGTGCGGC GCTGCGTGGC CCGTGGGGTC GGCTCGGCGA ACGAGAGCGC
GCCGAGGTGC TGCTCCGGAT CGCCGACGAA CTGGAGCGCC GCTTTGATGA CCTGGTCACC
GCTGAGGTGG CGGACACCGG CAAGACGATT TCGCAGGCCC GGACCCTGGA CATCCCGCGC
GGCGCGGCCA ACTTCCGTGC CTTCGCCGAG ATCGCGGCGA CCACACCGAC CGAGTCGTTC
AGCACCCGTA CCCCATCCGG TGGCCGTGCG CTGAACTACG CGCTCCGCAA GCCAGTCGGC
GTGGTCGCGG TGATCGTCCC GTGGAACCTG CCGTTGCTCC TGCTCACCTG GAAGGTCGCG
CCCGCGTTGG CGTGTGGCAA CGCGGTGGTG GTCAAGCCCA GTGAGGAGAC ACCCGCCTCG
GCGACCCTGC TCGCCGAGGT GATGGCCGCC GCCGGCGTGC CCGAGGGCGT CTTCAACGTC
GTGCACGGCT TCGGGCCCGG CTCGGCGGGG GAGTTTCTTA CCTCGCACCC CGACGTCAAC
GCGATCACCT TCACCGGCGA GTCAACCACC GGCGGAGCCA TCATGCGGGC CGCTTCCGAC
GGGGTGAAGG CGGTCTCCTT CGAGCTGGGT GGCAAGAACG CCGGGCTGGT CTTCGCCGAC
GCCGACCTGT CGGCGGCGGT GGCCGGCTCG GTGCGGTCCA GCTTCACCAA CGGTGGCCAG
GTCTGCCTCT GCACCGAACG CATCTACGTG CAGCGTCCGG TCTTCGCGGA GTTCACCGCC
CGGCTGGCCG AGCGGGCCGC CGAACTGCCG TACGGGTGGC CCGTCGACGA GGCCACGGCA
AACATGCCGC TGATCTCGCC CGTTCACCGG GAGAAGGTGC TCGGCCACTA CGAACTGGCC
CGAGCCGAGG GGGCGCAGGT CCTCGCCGGC GGCGGTACGC CGCGCTTCGG TGACGCCCGC
GACGGCGGCG CGTACATCCA GCCGACGGTG CTCGCCGGGC TCGGCCCGGA CGCGCGAACC
AACCGGGAGG AGATCTTCGG CCCGGTCGTG CACGTGGCGC CCTTCGACGA CGAGGAGGAG
GCGTACGCGC TGGCCAACGG CACCGAGTAC GGCCTGGCGG CGGCGGTGTG GACCCGAGAC
GTGGGCCGGG CCCACCGGGC CGGTGCCCGG TTGGACGCGG GAATCGTCTG GGTCAACACC
TGGTACCTGC GTGACCTGCG TACCCCGTTC GGTGGGGTGA AGTCCTCCGG CGTCGGCCGC
GAGGGCGGCG TTCATTCGCT GGGTTTCTAT TCCGAGCTCA CCAACGTCTG TGTGGACCTG
ACATGA
|
|---|
| Protein sequence | MTRWDARQMQ GQAPGGTALL PNFIAGEFVD SGRRFTKHSP VTGEPLFEVV EADQAGVDDA
VAAARAALRG PWGRLGERER AEVLLRIADE LERRFDDLVT AEVADTGKTI SQARTLDIPR
GAANFRAFAE IAATTPTESF STRTPSGGRA LNYALRKPVG VVAVIVPWNL PLLLLTWKVA
PALACGNAVV VKPSEETPAS ATLLAEVMAA AGVPEGVFNV VHGFGPGSAG EFLTSHPDVN
AITFTGESTT GGAIMRAASD GVKAVSFELG GKNAGLVFAD ADLSAAVAGS VRSSFTNGGQ
VCLCTERIYV QRPVFAEFTA RLAERAAELP YGWPVDEATA NMPLISPVHR EKVLGHYELA
RAEGAQVLAG GGTPRFGDAR DGGAYIQPTV LAGLGPDART NREEIFGPVV HVAPFDDEEE
AYALANGTEY GLAAAVWTRD VGRAHRAGAR LDAGIVWVNT WYLRDLRTPF GGVKSSGVGR
EGGVHSLGFY SELTNVCVDL T
|
|---|
| |