Gene Strop_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3505 
Symbol 
ID5059979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4024641 
End bp4025177 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID640475759 
Producthypothetical protein 
Protein accessionYP_001160314 
Protein GI145596017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CTGTCGTGAT TCCCGGCGGG AGATTCGGAG CGGGCGCTCC CCTGCTGATG 
TATGCCGGCG ATGTGGCAGA GCTGCGGGGC GCAACGGTCC ACCGATACTC GTGGTCGCAA
AAGTTCCCGA AGCCTGATCA GCCGGGAATC GAGAGCTGGG TGGGCGGTGA GATCGCTCCA
CTTCTTGACA GCATCAGCGG TCGCCCCCTG CTGATCGGCA AGTCGCTCGG CACGAACGCG
GCAGCGCTTG CCGCCGAAAG AACCTTGCCC GCCGTGTGGC TCACGCCCCT GCTCACTCTG
CCATGGGTGG TTGATGCGTT GGGCGGCGCA ACCGCGCCGT TCCTCCTCGT GGGTGGCACT
GCTGACAAGG TCTGGGACGG TGGCATTGCC CGCCGGCTGT CACCCCATGT GCTGGAGGTG
GACGGTGCGG ACCACGGCAT GTACGTACCC GGCCCACTTA CCGAGTCGAT CGCGGTGCTC
AGTCACGTCG TAGTCGCCGT GGAGGGGTTC CTCGACGCTA TTGGCTGGCC GAGCTAG
 
Protein sequence
MADAVVIPGG RFGAGAPLLM YAGDVAELRG ATVHRYSWSQ KFPKPDQPGI ESWVGGEIAP 
LLDSISGRPL LIGKSLGTNA AALAAERTLP AVWLTPLLTL PWVVDALGGA TAPFLLVGGT
ADKVWDGGIA RRLSPHVLEV DGADHGMYVP GPLTESIAVL SHVVVAVEGF LDAIGWPS