| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3499 |
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| Symbol | |
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| ID | 5059971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4018464 |
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| End bp | 4019105 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640475751 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_001160308 |
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| Protein GI | 145596011 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0591598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACA TGCACATTCC GCCGACGCCG CCCCGGGCGA TCGACGCCCG CGGTGGCGAC
AACATTGGCA ACCTCGACGA CTCGGTCTAC AACCGGTTGC TCAAGGAGCG GATCATCTTC
TTGGGCAGCG AGGTGACCGA CCAGGTCGCC AACCGCATCT GCGCGCAGCT GCTGCTGCTC
GCCGCGGAGG ACCCGGACCG CGACATCAAC CTCTGGATCA ACTCGCCGGG CGGCTCGGTC
TACTCGGGCA TGGCGATCTA CGACACGATG CAGTTCATTG ACAATGACGT GTCCACGGTG
GCGATGGGAA TGGCGGCCTC AATGGGCCAG CTGCTGCTCT GCGCCGGCAC CAAGGGCAAG
CGGTACGCCC TGCCGCACGC CCGGATCATG ATGCACCAGC CGTCGGGTGG CATGGGCGGT
ACCGCCTCGG ACATCGCTAT CCAGGCGGAG CAGATGCTCT ACACCAAGCG AATGTTCCAG
GAACGGGTCG CCTTCCACAC CGGCCAGAGC CAGGCGCAGA TCGAGGCGGA TTCGGATCGT
GACCGTTGGT TCACCGCCCA GGAGGCCATG GAGTACGGCT TCATCGACAA GGTGATCACC
GGGGCCGCCC AGGTTCCGGA AGGCGCCGGG ACCCTGAGCT GA
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| Protein sequence | MTDMHIPPTP PRAIDARGGD NIGNLDDSVY NRLLKERIIF LGSEVTDQVA NRICAQLLLL
AAEDPDRDIN LWINSPGGSV YSGMAIYDTM QFIDNDVSTV AMGMAASMGQ LLLCAGTKGK
RYALPHARIM MHQPSGGMGG TASDIAIQAE QMLYTKRMFQ ERVAFHTGQS QAQIEADSDR
DRWFTAQEAM EYGFIDKVIT GAAQVPEGAG TLS
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