| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3498 |
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| Symbol | |
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| ID | 5059970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4017787 |
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| End bp | 4018449 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640475750 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_001160307 |
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| Protein GI | 145596010 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.122717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACC TGAGCCTGCC GCCGCAGTTC GCGGCCGTGC ACAACCGCTA TGTCCTGCCG
TCATTCGTCG AGCGCACGTC GTACGGGGTG AAGGAGTCCA ACCCGTACAA CAAGCTCTTC
GAGGATCGGA TCATCTTCCT CGGGGTCCAG GTGGACGATG CCTCGGCCAA CGACGTGATG
GCCCAGCTGC TCACGCTGGA GGGCACCGAC CCGGACCGCG ACATCATCAT GTACATCAAC
TCGCCGGGTG GCTCGTTCAC GGCCATGACG GCGATCTACG ACACCATGCA GTACGTCCGG
CCGGACATTC AGACGGTCTG CCTGGGGCAG GCGGCCAGCG CGGCGGCGAT GCTACTCTCG
GCGGGTACGC CCGGAAAGCG GATGGCCCTG CCGAACTCGC GGATCATCAT CCACCAGCCT
GCCACGGAGG GGGGCTACGG GCAGGGCTCG GATATCGAGA TCCAGGCCCG GGAGATTCTG
CGGATGCGCA CCCAGCTGGA AGAGATGCTC TCCCGGCACT GCAACCAGCC GGTGGAGAAA
GTCCGCAAGG ATATCGATCG GGATAAGATT ATGACGGCCG AGGAGTCCCG TGAGTACGGG
CTGGTCGACA CCATCCTCAC CAGCCGTAAG AAGGGCCTGC TGGCCGCTAA CGCCGCCAGC
TGA
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| Protein sequence | MTDLSLPPQF AAVHNRYVLP SFVERTSYGV KESNPYNKLF EDRIIFLGVQ VDDASANDVM
AQLLTLEGTD PDRDIIMYIN SPGGSFTAMT AIYDTMQYVR PDIQTVCLGQ AASAAAMLLS
AGTPGKRMAL PNSRIIIHQP ATEGGYGQGS DIEIQAREIL RMRTQLEEML SRHCNQPVEK
VRKDIDRDKI MTAEESREYG LVDTILTSRK KGLLAANAAS
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