Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3497 |
Symbol | clpX |
ID | 5059969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4016295 |
End bp | 4017584 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640475749 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001160306 |
Protein GI | 145596009 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.659489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACGGA TCGGTGACGG CGGCGACCTA TTGAAGTGCT CCTTCTGCGG GAAATCGCAG AAGCAGGTCA AGAAGCTTAT CGCCGGTCCC GGCGTCTACA TCTGCGACGA GTGTATCGAT CTCTGTAACG AGATCATCGA GGAGGAGCTG GCCGAGTCGG GTGAAGTGAA GTGGGAAGAG CTTCCCAAGC CGATGGAGAT CTGTCAGTTC CTTGACAATT ACGTCGTGGG TCAGGCTCAG GCCAAGAAGG CTCTCGCCGT CGCGGTCTAC AACCACTACA AGCGAATTCA GGCCGAGGCG ACCGGTGCGC CCAGCGCGGA CAGCGTTGAG CTGGCCAAGT CCAACATTCT GCTGCTTGGC CCCACCGGGT GTGGCAAGAC CCACCTGGCG CAGACCCTGG CCCGGATGCT CAACGTGCCG TTCGCCATCG CGGACGCCAC TGCCCTGACC GAGGCCGGGT ACGTCGGGGA GGACGTCGAG AACATTCTCC TCAAGCTGAT CCAGGCCGCC GACTACGACA TCAAGCGCGC CGAGACCGGG ATCATCTACA TCGACGAGGT CGACAAGATC GCGCGCAAGT CGGAGAATCC GTCGATCACC CGCGACGTGT CCGGCGAGGG TGTGCAGCAG GCACTGCTCA AGATGCTGGA GGGGACGGTT GCGAACGTTC CTCCCCAGGG CGGCCGCAAG CATCCGCATC AGGAGTTCAT TCAGATCGAC ACCACCAACG TGCTCTTCAT CTGCGGCGGA GCCTTCGCGG GTCTCGACCA GATAATCGAG GCGCGTACCG GCCACGGTGG CACGGGTTTC GGTGCCCGGC TGCGGGCGGT CTCGGAGCGT TCGACCGATG ACACCTTCAG CCAGGTGATG CCGGAGGACA TGCTGAAGTT CGGTCTGATC CCCGAGTTCA TCGGTCGGCT TCCGGTGATC ACCAACGTTC GCAGCCTCGA CCGTCCGGCT CTGGTGCAGA TCCTCACCGA GCCGCGCAAC GCGCTCGTCC GGCAGTACCA GCGCCTCTTC GAGTTGGACG GCGTCGAGCT GGAGTTCGAG CAGTCCGCCC TGGAGGCGAT TGCCGACCAG GCGATGCTCC GTGGCACCGG TGCCCGTGGT CTTCGCGCGA TCATGGAGGA GGTTCTTCTC TCCGTGATGT ACGAGGTGCC CAGCAACCCT GACGCCGCCC GAGTTCTGAT CAATCGCGAA GTGGTGCTGG AGAACGTCAA CCCGACGATC GTTCCGCGTG AGTTCACCAG CCGTCGGTCC CGGCGGGAGC GTGAGGAGAA GTCCGCGTGA
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Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL AESGEVKWEE LPKPMEICQF LDNYVVGQAQ AKKALAVAVY NHYKRIQAEA TGAPSADSVE LAKSNILLLG PTGCGKTHLA QTLARMLNVP FAIADATALT EAGYVGEDVE NILLKLIQAA DYDIKRAETG IIYIDEVDKI ARKSENPSIT RDVSGEGVQQ ALLKMLEGTV ANVPPQGGRK HPHQEFIQID TTNVLFICGG AFAGLDQIIE ARTGHGGTGF GARLRAVSER STDDTFSQVM PEDMLKFGLI PEFIGRLPVI TNVRSLDRPA LVQILTEPRN ALVRQYQRLF ELDGVELEFE QSALEAIADQ AMLRGTGARG LRAIMEEVLL SVMYEVPSNP DAARVLINRE VVLENVNPTI VPREFTSRRS RREREEKSA
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