Gene Strop_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3497 
SymbolclpX 
ID5059969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4016295 
End bp4017584 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content63% 
IMG OID640475749 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_001160306 
Protein GI145596009 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.659489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGGA TCGGTGACGG CGGCGACCTA TTGAAGTGCT CCTTCTGCGG GAAATCGCAG 
AAGCAGGTCA AGAAGCTTAT CGCCGGTCCC GGCGTCTACA TCTGCGACGA GTGTATCGAT
CTCTGTAACG AGATCATCGA GGAGGAGCTG GCCGAGTCGG GTGAAGTGAA GTGGGAAGAG
CTTCCCAAGC CGATGGAGAT CTGTCAGTTC CTTGACAATT ACGTCGTGGG TCAGGCTCAG
GCCAAGAAGG CTCTCGCCGT CGCGGTCTAC AACCACTACA AGCGAATTCA GGCCGAGGCG
ACCGGTGCGC CCAGCGCGGA CAGCGTTGAG CTGGCCAAGT CCAACATTCT GCTGCTTGGC
CCCACCGGGT GTGGCAAGAC CCACCTGGCG CAGACCCTGG CCCGGATGCT CAACGTGCCG
TTCGCCATCG CGGACGCCAC TGCCCTGACC GAGGCCGGGT ACGTCGGGGA GGACGTCGAG
AACATTCTCC TCAAGCTGAT CCAGGCCGCC GACTACGACA TCAAGCGCGC CGAGACCGGG
ATCATCTACA TCGACGAGGT CGACAAGATC GCGCGCAAGT CGGAGAATCC GTCGATCACC
CGCGACGTGT CCGGCGAGGG TGTGCAGCAG GCACTGCTCA AGATGCTGGA GGGGACGGTT
GCGAACGTTC CTCCCCAGGG CGGCCGCAAG CATCCGCATC AGGAGTTCAT TCAGATCGAC
ACCACCAACG TGCTCTTCAT CTGCGGCGGA GCCTTCGCGG GTCTCGACCA GATAATCGAG
GCGCGTACCG GCCACGGTGG CACGGGTTTC GGTGCCCGGC TGCGGGCGGT CTCGGAGCGT
TCGACCGATG ACACCTTCAG CCAGGTGATG CCGGAGGACA TGCTGAAGTT CGGTCTGATC
CCCGAGTTCA TCGGTCGGCT TCCGGTGATC ACCAACGTTC GCAGCCTCGA CCGTCCGGCT
CTGGTGCAGA TCCTCACCGA GCCGCGCAAC GCGCTCGTCC GGCAGTACCA GCGCCTCTTC
GAGTTGGACG GCGTCGAGCT GGAGTTCGAG CAGTCCGCCC TGGAGGCGAT TGCCGACCAG
GCGATGCTCC GTGGCACCGG TGCCCGTGGT CTTCGCGCGA TCATGGAGGA GGTTCTTCTC
TCCGTGATGT ACGAGGTGCC CAGCAACCCT GACGCCGCCC GAGTTCTGAT CAATCGCGAA
GTGGTGCTGG AGAACGTCAA CCCGACGATC GTTCCGCGTG AGTTCACCAG CCGTCGGTCC
CGGCGGGAGC GTGAGGAGAA GTCCGCGTGA
 
Protein sequence
MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL AESGEVKWEE 
LPKPMEICQF LDNYVVGQAQ AKKALAVAVY NHYKRIQAEA TGAPSADSVE LAKSNILLLG
PTGCGKTHLA QTLARMLNVP FAIADATALT EAGYVGEDVE NILLKLIQAA DYDIKRAETG
IIYIDEVDKI ARKSENPSIT RDVSGEGVQQ ALLKMLEGTV ANVPPQGGRK HPHQEFIQID
TTNVLFICGG AFAGLDQIIE ARTGHGGTGF GARLRAVSER STDDTFSQVM PEDMLKFGLI
PEFIGRLPVI TNVRSLDRPA LVQILTEPRN ALVRQYQRLF ELDGVELEFE QSALEAIADQ
AMLRGTGARG LRAIMEEVLL SVMYEVPSNP DAARVLINRE VVLENVNPTI VPREFTSRRS
RREREEKSA