Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3494 |
Symbol | |
ID | 5059963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4008344 |
End bp | 4009033 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475743 |
Product | hypothetical protein |
Protein accession | YP_001160303 |
Protein GI | 145596006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.128757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGGTA TGTCCAACGG GCACCTCAGT GAACGCCCCG TCAACGAGGC CCCCGAGCCG GTCGACCTGA CCGACGAGCC GATCCGCCTC GACGGCGAAG ACCCGGCCCT GAAGCCCGAA CGAGCGGGCG CCCGAACTCG TCGCCGCCGG GTGGTGTGGC TGCTCGCAAC AGCCGTGGGG CTCGCTGGTG TCGGCGCCTT CGGCACCGTG TCCTGGCGCA TCTTCCAGCA GCAGGACGCC ACGATAGCCA GCCCGGCGCA GGTGGCCGGG TTGACCCGGG ACGACAGCGA GCAGGCCCGC AGCACCGCCG ACTATCTCCG TAGTGGGTTC GCGGCCGACA TCGAGTTGGA CCAGAGCTTC GGCACCGTCT ACCGGGCTCC CACAGGCGAG CGTCGGCCGG TGCTCCTCTT CGGCGGCACC ACGCTGCTCT GGCAGCCCGA ACGCGACCTG GACAGCCTCT TCGGGCTGAT GGCCGACGAG ACTGGTCAAG TCAGCGGGCT GCAGAAGCTC TCCCCGGGTC CCCTCGGTGG CGTGCTGAAG TGTGGCACCA CCAGCGGCAC AGGTGGAGAG TTCGCCGTGT GTGGCTGGGC AGACCATGGA AGCGTGGTGA TGGGTCTGTT TCCCGATCAT CGGGCGGCGG AGGCCGGTGA CCTGTTCCGG AGAATGCGCA ACGAGATGCA GACCCGCTGA
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Protein sequence | MAGMSNGHLS ERPVNEAPEP VDLTDEPIRL DGEDPALKPE RAGARTRRRR VVWLLATAVG LAGVGAFGTV SWRIFQQQDA TIASPAQVAG LTRDDSEQAR STADYLRSGF AADIELDQSF GTVYRAPTGE RRPVLLFGGT TLLWQPERDL DSLFGLMADE TGQVSGLQKL SPGPLGGVLK CGTTSGTGGE FAVCGWADHG SVVMGLFPDH RAAEAGDLFR RMRNEMQTR
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