Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3493 |
Symbol | valS |
ID | 5059962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4005665 |
End bp | 4008283 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475742 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001160302 |
Protein GI | 145596005 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.180306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGA GACTGGATGC CCAACGCCCC GACGCCCCGA CCCTTGCCGG CCAGTACCTG CCGGGCGAGG TGGAGCAGCG ACGGTACGAG CAGTGGGTAG CCGGCGGACA CTTCCGCGCG TCGGCGGAGA GCGACAAGCC CCCGTACACC ATCGTCATCC CGCCGCCGAA CGTCACCGGC TCGCTGCACA TGGGGCACGC GCTGGACCAC ACGATGCAGG ACGCTCTGGT CCGGCGCAAG CGGATGCAGG GCTACGAGGC GCTGTGGGTG CCCGGAATGG ATCACGCCGG CATCGCCACC CAGAACGTTG TGGAGCGGCA GCTGGGCGAG CAGGGTCTGT CCCGGCATGA CCTCGGCCGG GAGGCGTTCG TTGAACGGGT CTGGGAGTGG AAGGCCGAGT CCGGTGGCGC GATTCTTGGG CAGATGCGCC GGCTCGGCGA CTCTGTCGAC TGGGAGCGGG AACGCTTCAC CATGGACGCG GGCCTGTCGC GGGCCGTCCA GACCATGTTC AAGGCGCTGT ACGACGACGG GTTGATCTAC CGGGCCGAGC GGATCATCAA CTGGTGCCCG CGCTGCCTGA CCGCGCTGTC GGACATCGAG GTGGAGCACA CGGACGACGA CGGTGAGTTG GTGTCGATCC GCTACAGCGA CGAGGTCGTG GTGGCGACCA CCCGGGCGGA GACGATGCTC GGTGATACCG CCGTCGCGGT GCATCCCGAG GACGAGCGGT ATCAGCATCT GATCGGCACC GAGGTCGAGC TGCCGCTGAC CGGCCGGTGC ATTCCGATTG TCGGTGACGA GCACGTTGAC CCGACCTTCG GCACCGGCAT GGTGAAGGTG ACGCCGGCGC ACGACCCGAA CGACTTCGAG ATCGGCCAGC GGCACGACCT GCCGTCCCTC ACGATCATGG ACGAACGGGG GGTCATCACC GCGCACGGGC CGTTCGCGGG CCTGGATCGG TACGAGGCGC GTCCCGCCAT CGTCGCCGCC CTGCGTGAGC AGGGCCGGAT CGTGGCCGAG AAGCGCCCGT ACACGCATGC GGTCGGTCAC TGCTCGCGCT GCCGCACGTC GGTGGAGCCC CGGCTGTCGT TGCAGTGGTT CATCAACACC TCGCCGTTGG CGAAGGCGGC TGGTGACGCG GTGCGGGACG GACGGGTGAG GATTGAGCCG GCGGAGCTGG CCAAGCGGTA CTTCGCCTGG GTCGACAACA TGCACGACTG GTGCATCTCC CGCCAGCTGT GGTGGGGGCA CCGCATCCCG GTCTGGTACG GCCCGGCCGG TGAGGTCGTC TGCGTCGGCC CGGACGAGAC GCCGCCGGCC GGTGCCGGTT GGCGCCAGGA CGAGGATGTC CTGGACACCT GGTTCTCCAG CGGCCTGTGG CCGTTCTCCA CTCTCGGCTG GCCGGAGCAG ACCCCGGAGT TGGCCAAGTT CTACCCGACG AGCGTCCTGG TCACCGGCTA CGACATCCTC TTCTTCTGGG TCGCCCGGAT GATGATGTTC GGCCTGTACG CGATGGACGG CCGGCAGCCC TTCGACGTGG TCGCGCTGCA CGGCATGGTC CGTGACGAGC ACGGCAAGAA GATGTCGAAG TCGTTCGGCA ACGTGATTGA CCCGCTGAAC TGGATTGATC GGTTCGGCGC CGATGCCACC CGCTTCACCC TGACCCGTGG CGCGAACCCC GGCGGGGACG TCGCCGTCAG TGAGGAGTGG TGCCAGGGCT CCCGGAACTT CTGCAACAAG CTCTGGAACG CGACTCGGTT CGCGTTGTTG AACGGTGCAC ACACCCAGGG GGCGCTCCCG TCGGCGACGG AACTGGCACC AGTCGACCGG TGGGTCCTGT CCCGGCTCGC GCGCGTCACC GCGGAGGCGG AGGAGCAGTT CGAGGCGTAC GAGTTCGCGA AGGCGTGTGA CCTGCTGTAC CACTTCGCGT GGGATGAGGT CTGCGACTGG TACGTGGAGT TGACCAAGCC GCTACTGGCC GCCGGCGGTC CGGCTGCGGA CACCACCCGG CGGGTCCTCG GGCATGTGCT GGACCAGCTG CTGCGGCTGC TGCACCCGGT GATCCCATTC GTCACCGACG AGTTGTGGAT CGCACTGACC GGCGGTCAGA CGATCATGAC GGCGGCGTGG CCGGCCGCTG ACCGGGCGTT GGTCGACGCC GCCGCGGAGA CGGAGATCTC CACGCTCCAG CGGGTGGTCA CCGAGATCCG GCGGTTCCGC TCTGACCAGG GGCTGCGCCC GACTCAGCGG GTCGTCGCCC GGCTCGACGG GCTGGCCGGT GCCGGTATCG CCGGGCACGA ACCGCTGGTC CGTTCGCTGG TGCGCCTTGA TGCGGCGGGC GCCGACTTCC AGGCCAGCGC CACCCTTACC CTGCCCGGTG AGGTGTGTGT CGCGCTGGAC ACCCGCGGTT CGATCGACGT GGCGGCCGAG CGGGCACGGT TGACCAAGGA CCGTGCCGCG GCGGCGAAGG AGGCCGGACA GGCCCGGACG AAGCTCGACA ACCCGGCGTT CGTGGGGAAG GCACCCGAGC CGGTGGTGCA GAAGATCCGC GACCGGCTCA CCGCCGCCGA GGCCGACCTG GTGCGCATCG ACGCCGCTCT GGAGGCATTG TCCTCGTGA
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Protein sequence | MTERLDAQRP DAPTLAGQYL PGEVEQRRYE QWVAGGHFRA SAESDKPPYT IVIPPPNVTG SLHMGHALDH TMQDALVRRK RMQGYEALWV PGMDHAGIAT QNVVERQLGE QGLSRHDLGR EAFVERVWEW KAESGGAILG QMRRLGDSVD WERERFTMDA GLSRAVQTMF KALYDDGLIY RAERIINWCP RCLTALSDIE VEHTDDDGEL VSIRYSDEVV VATTRAETML GDTAVAVHPE DERYQHLIGT EVELPLTGRC IPIVGDEHVD PTFGTGMVKV TPAHDPNDFE IGQRHDLPSL TIMDERGVIT AHGPFAGLDR YEARPAIVAA LREQGRIVAE KRPYTHAVGH CSRCRTSVEP RLSLQWFINT SPLAKAAGDA VRDGRVRIEP AELAKRYFAW VDNMHDWCIS RQLWWGHRIP VWYGPAGEVV CVGPDETPPA GAGWRQDEDV LDTWFSSGLW PFSTLGWPEQ TPELAKFYPT SVLVTGYDIL FFWVARMMMF GLYAMDGRQP FDVVALHGMV RDEHGKKMSK SFGNVIDPLN WIDRFGADAT RFTLTRGANP GGDVAVSEEW CQGSRNFCNK LWNATRFALL NGAHTQGALP SATELAPVDR WVLSRLARVT AEAEEQFEAY EFAKACDLLY HFAWDEVCDW YVELTKPLLA AGGPAADTTR RVLGHVLDQL LRLLHPVIPF VTDELWIALT GGQTIMTAAW PAADRALVDA AAETEISTLQ RVVTEIRRFR SDQGLRPTQR VVARLDGLAG AGIAGHEPLV RSLVRLDAAG ADFQASATLT LPGEVCVALD TRGSIDVAAE RARLTKDRAA AAKEAGQART KLDNPAFVGK APEPVVQKIR DRLTAAEADL VRIDAALEAL SS
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