| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3482 |
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| Symbol | |
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| ID | 5059951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3988653 |
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| End bp | 3991727 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475731 |
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| Product | ribonuclease |
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| Protein accession | YP_001160291 |
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| Protein GI | 145595994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAGA ACGAGCCCGA GGGCGGCGAA CGCACCGGCC TCCACCCGGA TGGCGAGACC
GCCGAACACC GTGTTGGCGA CAGCGCTGCC TCCGCGAACA CCACGTCGGA GGGGAGCGAC
CCGGCTGCCC GGGAACCCAC CGGGGGCACC TCCGAGTCGG CCGGTCCAGC GCCGAGTGAG
GCGGTGGTCA CCGGCGCGAC CGAGTTGGGC GAGCCGGTTG CCCGGGTCCG CAAGCGGGCC
AGCCGGAAGC GGGTGACCCC GGTCAACCGG CCGGAGCAGA CCGAGGCGCC GATCGAGGCG
GGTAGCGCCG CCGTGCCGGG GGCGGGCGAG GCGCCCCAGG CCGAGGTGCT TGCCCCGGTC
GCGGGCGACG GTGAGCCGCC GACGAAGGCG ACGCGTCGTC GCCGGAAGGC CACGACGGCC
AAGGCACCGG CGGAGCCGGT GACGGCCGCC GGTGGGCAGG AGGCGGCGGC GGACATCGCG
CCGCCGGCGA AGGCGACACG GACCCGCCGT AAGAAGACCG CTCCTGCGCC GGTCGAGTCC
ACCTCCACGC CGGTCGAGTC CACCTCCACG CCGGTCGAGT CGACTGCCGC TCCGGTTGAC
CCGATTGCTC CGGTGGAGCC GGCTGAGACC GCACCGGTTG CCGCGGCTGA GGAGGAGCAG
AACGAGTCGA CTCCGCCCGC CGGGGCCGCG GTGGGGGAGG TACCGCCCGG GGTGGCGGTG
GCCGAGCCGG TTGAGCCGGA GCGCCCGGCC CGTGGCCGGC GCGCGCGGCT CTCCGCCCCA
ACAGTGCTGT TCATGGCTCC ACTGCCCGAG GAGTCGGCGC CGGCGAGGCC CGCCGAGGAA
CGGCCCTCAG CCGAGCCGGC CGCTGAGGAA CTGGTCGAGA CGGCGCGTCG CCGCCGGCGG
GGCCGCCGCA ACGGCGAGTC GACCGCGGAG GTCGAGACCG GGGAGACCGA GGAGATCGAG
GAGGCCGAGG AGGGCTCCGA GGGCGAGGAC GAGGACGACG CCACCGGTGG CCGGCGCCGT
CGACGCCGGG GTCGTCGCGG TCGTGGCCGG GGCAAGGGGG GCACCGACGA GGTCGAGGAG
CAGGAGGCCG AGGAGGCCGA GGAGGCCGCT GTCCAGGCCG AGGCGGCGGA GCCGGTGGCC
GAGGAGGACG ATGAGGCCGA GGCCGAGGCC GGAGGAGGCG ACGGGCTGAC CCGCCGCCGT
CGACGTCGGC GGCGGCGTGG TGCCGGAGAC GTGGAGGTCG CCGCCGAGGA CGGGGTGCCC
ACGGTCGTCA AGATTCGGGA GCCACGTCGC ACCGTCGACG AGGTGCAGGG CGTCTCCGGC
TCGACCCGGC TGGAGGCCAA GCGCCAGCGT CGCCGGGACG GCCGCGAGCA GCGCCGTACC
CGGCCGCCGA TCCTCAGCGA GGCGGAGTTC CTGGCCCGCC GGGAAGCGGT GGATCGGGTG
ATGGCGGTTC GGCAGCGGGG CGACCGGACA CAGATCGCCG TGCTGGAGGA CGGCGTGCTG
GTCGAGCACT ACGTCACCCG TAACTCGGCT GTCACCATGG CTGGCAACGT CTATCTGGGC
AAGGTGCAGA ACGTTCTGCC CAGCATGGAG GCGGCGTTCG TCGACATCGG GCGTGGCCGC
AACGCCGTGC TCTACGCGGG TGAGGTCAAC TGGGACGCCA CCGGGCTGGA AGGGCGGGCC
CGCTCGATCG AGCAGGCCCT CAAGTCCGGT GACTCGGTCC TGGTGCAGGT CACCAAGGAT
CCGATCGGAC ACAAGGGTGC ACGGCTGACC AGCCATGTGG CGCTCTCCGG CCGACACCTC
GTCTACGTGC CGGGCGGCAA CGCCTCCGGG ATCAGCCGCA AGCTGCCGGA CAACGAGCGC
AAGCGCCTGC GGGACGCGCT GAAGAAGCTG GTTCCGGAGG GAGCGGGCGT GATCGTCCGC
ACCGCCGCCG AGGGCGCCAC CGAGGACGAG CTGGCGCGGG ACGTCAAGCG GTTGCAGGCG
CAGTGGGAGG ACATCCAGGC GAAGGCGGGC CGGGGCGGTG CGCCGGTGTT GCTCTACGAG
GAGCCAGACC TGGTCATCCG GGTTGTCCGG GACCTCTTCA ACGAGGACTT CCGGGAGCTG
ATGATCGAGG GTGAGGGCGC GTACGACCTG GTCGAGTCGT ACTTGTCGCA CGTCTCGCCG
GACCTGGTCG CCCGGCTGCG GCGACACGTG GGCACCGTGG ACGTCTTCAC TGAGTACCGG
ATCGACGAGC AGATCCTGAA GGGCCTGGAC CGCAAGGTCT TCCTCCCCTC CGGGGGGCAC
CTGGTGATCG ACCGTACTGA GGCGATGACC GTGGTTGACG TGAACACCGG CAAGTACACC
GGTGCCGGCG GGAACCTGGA GGAGACGGTT ACCCGGAACA ACCTGGAAGC CGCCGAGGAG
ATCGTCCGTC AGCTGCGGCT GCGCGACATC GGTGGCATCG TGGTCATCGA CTTCATTGAC
ATGGTCCTGG AGTCGAACCG GGAGTTGGTG CTGCGGCGGC TGACCGAGTG CCTTGGGCGG
GACCGCACCA AGCATCAGGT GACGGAGATC ACCTCACTCG GTCTGGTGCA GATGACCCGC
AAACGGATCG GTGCCGGCCT GCTGGAGGCG TTCAGTGAGA CCTGTGAGTG CTGCAAGGGC
CGTGGGTTGA TCCTGCACAC CGAGCCGGTG CCGGAGAAGC CACGTGCCGG TGGCACCGGG
GAGAAGGTCA AGGCGGTGGC GTCGGCCGAG GCGGGCGGGT CGTCCCGCCG GCGGGCGCGG
AAGGGGGCTG TCGCCGCCGA GCGGACCGTG GTCGAGAGTG AGGAGGCCCA GGACGCCGGT
ACCACCGACA CCCCGGAGGT CACGGCCACC ACACCCGGTG CTGACTATTA CGACACGATG
GGCTATGACC TGTCCCGGTA TGAGGTGGAA ACACCGGCCC CGAGCGTGGT GGCGAGCCAG
AGCGGCGACA CGGCGCGGCT CGCGGCGCCC GACGACCCGG ACGCGGTGGG CGGCGACGAC
GGCGAGGAGT CCGAGACCGC CTCGGGCCGG CGGCGCTCCC GCCGGGGCGG TGCGCGGCGC
CGTACCCGCC CCTGA
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| Protein sequence | MLENEPEGGE RTGLHPDGET AEHRVGDSAA SANTTSEGSD PAAREPTGGT SESAGPAPSE
AVVTGATELG EPVARVRKRA SRKRVTPVNR PEQTEAPIEA GSAAVPGAGE APQAEVLAPV
AGDGEPPTKA TRRRRKATTA KAPAEPVTAA GGQEAAADIA PPAKATRTRR KKTAPAPVES
TSTPVESTST PVESTAAPVD PIAPVEPAET APVAAAEEEQ NESTPPAGAA VGEVPPGVAV
AEPVEPERPA RGRRARLSAP TVLFMAPLPE ESAPARPAEE RPSAEPAAEE LVETARRRRR
GRRNGESTAE VETGETEEIE EAEEGSEGED EDDATGGRRR RRRGRRGRGR GKGGTDEVEE
QEAEEAEEAA VQAEAAEPVA EEDDEAEAEA GGGDGLTRRR RRRRRRGAGD VEVAAEDGVP
TVVKIREPRR TVDEVQGVSG STRLEAKRQR RRDGREQRRT RPPILSEAEF LARREAVDRV
MAVRQRGDRT QIAVLEDGVL VEHYVTRNSA VTMAGNVYLG KVQNVLPSME AAFVDIGRGR
NAVLYAGEVN WDATGLEGRA RSIEQALKSG DSVLVQVTKD PIGHKGARLT SHVALSGRHL
VYVPGGNASG ISRKLPDNER KRLRDALKKL VPEGAGVIVR TAAEGATEDE LARDVKRLQA
QWEDIQAKAG RGGAPVLLYE EPDLVIRVVR DLFNEDFREL MIEGEGAYDL VESYLSHVSP
DLVARLRRHV GTVDVFTEYR IDEQILKGLD RKVFLPSGGH LVIDRTEAMT VVDVNTGKYT
GAGGNLEETV TRNNLEAAEE IVRQLRLRDI GGIVVIDFID MVLESNRELV LRRLTECLGR
DRTKHQVTEI TSLGLVQMTR KRIGAGLLEA FSETCECCKG RGLILHTEPV PEKPRAGGTG
EKVKAVASAE AGGSSRRRAR KGAVAAERTV VESEEAQDAG TTDTPEVTAT TPGADYYDTM
GYDLSRYEVE TPAPSVVASQ SGDTARLAAP DDPDAVGGDD GEESETASGR RRSRRGGARR
RTRP
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