| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3475 |
|---|
| Symbol | |
|---|
| ID | 5059944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3982542 |
|---|
| End bp | 3985055 |
|---|
| Gene Length | 2514 bp |
|---|
| Protein Length | 837 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475724 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001160284 |
|---|
| Protein GI | 145595987 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.60984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCC TTACCCGCGT AGAGGCGACC GCGCGTGCCG CGGCGATTTC CGTCGAGTCC
TATCAGGTGG ACCTCGACGT GACCGGCGAC GAACGGTTTC GTTCGCAGGT CACCATCCGG
TTCCGGGCGA CCCCCGGCTC CCGGACGTTC GTCGAATGCC GGCCGCAGAC GCTGTGCTCG
GTCCGCATCA ACGACACCGA CCTTGACCCC GCCATGCTGG TCGACAACCG GCTGCCCCTG
ACCGGCCTCG CCGAGCGGAA CACGCTGACG ATCGAGGCGG AGATGGGGTA CACCAATACC
GGCGAGGGCA TGCACCGCTT TGTCGACCCG GCCGACGGGG AGACCTACCT GTACGCCATG
TCCTTCCTCG ACCAGGCCCA GCGCATCTTC GCCGCGTTCG ACCAACCCGA CCTCAAGGCC
CCGGTCACCC TTACGGTAAC CGCCCCCGAG CACTGGACCG TCGCCGCGAA CGGTGTGCTG
GCTGCCTCCC CGCGTCCAGG CCGGTGGGAG TTCGCCCCGA CCGTACCGTT GGCCACGTAC
CTCGTCTCGC TGATCGCCGG GCCCTGGTAC GTCCACCGGG ACGAGCATGA CGGCATCCCG
CTCGGCGTCT GGTGCCGCCG GTCGCTCGCA GCGCACCTGG ACTCGGAGAT CGACGAAATT
CTCACGATCA CGAAGCAGTG CCTGGACCGG TACCACCAGC TCTTTGCGCA GCGGTACCCG
TTCGGTAAGT ACGACCAGGC GTTCGTGCCG GAGTTCAACG CCGGAGCCAT GGAGAATCCG
GGGCTGGTGA CGATCCGGGA CGACTACGTC TTCCGATCCG CGGTCACCGA CAGCGAGCGC
GAGTGGCGGG CCAGCACCAT CGCGCACGAG ATGGCCCATA TGTGGTTCGG GGACCTGGTC
ACCATGCGGT GGTGGGACGA TCTGTGGTTG AACGAGTCGT TCGCCGAGTA CATGGCCACC
CGAGTGACCG CGGAGGCCAC CCGTTTCGAT CGGGGTTGGA CGACCTTCGC GATGCGGCGC
AAGATCTGGG GGTACGCGGC CGACCAGCGC CCGTCCACCC ACCCGGTGGC CCCGGCGGAG
GTGACCGACG CCGCCCAGGG CCTGCTCAAC TTCGACGGCA TTTCGTACGC GAAGGGTGCC
GCGGTGCTGC GCCAGCTCGT GGCCTGGCTC GGCGACGAGG ACTTCCTGGC CGGGCTGAAC
GCGTACTTCG CCGAGCACCG GTTCGGCAAT GCCACCCTGG AAGATCTGCT GGCCAGCCTG
ACCACGGCCA GCGGGCGCGA CCTGACCGGC TGGGCCCGGT GCTGGTTGCG TACCGCGCAG
GTCAACACGC TGCGTACGAA GGTGTCGGTC GATGTCGATG GTCGGTACAC CGAGGTGGCC
CTGGTGCAGA GCGCACCGGA TTCCCATCCG GTGCTGCGCC CGCACCGGGT TGGCCTCGCC
CGGTATGCCG CCGACGGCAC GGTGGAGCAC CGGCTGGTAG ATCTTGAGCC GTCCGTCGAC
GGTGGTCGCA CGGTGCTCGC CGACCTGGCC GGGCAGCGGG CCGCCCAGCT GCTGCTGCCG
AACGCCGGCG ACCTGACCTT CGCCAAGATC CGGCTGGATC CGGCCTCGGC GGACGCGGTG
CCGCTGCTGC TGCCCCGCCT GGCCGATTCG CTCGCGCGGG CGCTGCTCTG GGGAGCCGAA
CTGGACGCCG TCACCGATGG GGAACGGCCG GTGACGGAGC TGGTGCAGCT GATCGCCACC
GCGCTACTGG CCGAGACCGA GGTGGTGATC GTCGAGGATG TGGTCGCGAT CAGCCGATCG
CTGATCGACC GCTACCTCGC CCCGTCCGCC CGCGAGGCGG CCCTCGCTCT GGTCTCGGTG
GCCACCGGGC AGCTGCTGGC CACCGCGCCG CCCGGTGGTT CGCTTCAGCT TGCCGCGGCC
CGGGGATGGG TGGCCGCGAC CGGCGACGTG GACCGGTTGG CTGGCTGGCT GGCCGGCCAG
GTCGGGCCGC CGGGTCTCGC GATCGACGCG GAGCTGCGGT GGGCGGTGCT GGGGCGGCTG
GTGGCGCTGG GTGGGGCCGG CGCGGCGGAG ATCGCCGCCG AGGCGGCGGC CGACCCGAGC
GCCACCGGTG GCGAGCGGGC CGCCCGTTGT CGTGCGGCCC TGCCCGACCC GGCGGCCAAA
CAGGCCGCCT GGAAGATCAT CGTGGCGGAT ACCGAAAGCT CAAACCGCGT GGTCGAGGCC
ACCGCAGAGG GCTTCTGGCA GCCGGAGCAG GCGACGCTGA CCGCTCCGTA CGTGGGGCGC
TACCTTGCCG ACATGCCGGC CGCCTCGCGA CTGCGTACCC CCCGGATGGC GGAGCGGATC
GCGGAGCTGG CGTTCCCGCG CTATGCCGTC GCGCAGAGCA CCCGGGAGGG CGTCGCGGAG
CTGCTCGCCC GGAGGGATCT CACCCGGGGC CTTCGTCGGG CGGTGATCGA CGCGGACGAC
GATCTGCGCC GGGCACTGGT CGCCCGGACC GCCGTCGCGG CGGTTGACGC CTGA
|
|---|
| Protein sequence | MPSLTRVEAT ARAAAISVES YQVDLDVTGD ERFRSQVTIR FRATPGSRTF VECRPQTLCS
VRINDTDLDP AMLVDNRLPL TGLAERNTLT IEAEMGYTNT GEGMHRFVDP ADGETYLYAM
SFLDQAQRIF AAFDQPDLKA PVTLTVTAPE HWTVAANGVL AASPRPGRWE FAPTVPLATY
LVSLIAGPWY VHRDEHDGIP LGVWCRRSLA AHLDSEIDEI LTITKQCLDR YHQLFAQRYP
FGKYDQAFVP EFNAGAMENP GLVTIRDDYV FRSAVTDSER EWRASTIAHE MAHMWFGDLV
TMRWWDDLWL NESFAEYMAT RVTAEATRFD RGWTTFAMRR KIWGYAADQR PSTHPVAPAE
VTDAAQGLLN FDGISYAKGA AVLRQLVAWL GDEDFLAGLN AYFAEHRFGN ATLEDLLASL
TTASGRDLTG WARCWLRTAQ VNTLRTKVSV DVDGRYTEVA LVQSAPDSHP VLRPHRVGLA
RYAADGTVEH RLVDLEPSVD GGRTVLADLA GQRAAQLLLP NAGDLTFAKI RLDPASADAV
PLLLPRLADS LARALLWGAE LDAVTDGERP VTELVQLIAT ALLAETEVVI VEDVVAISRS
LIDRYLAPSA REAALALVSV ATGQLLATAP PGGSLQLAAA RGWVAATGDV DRLAGWLAGQ
VGPPGLAIDA ELRWAVLGRL VALGGAGAAE IAAEAAADPS ATGGERAARC RAALPDPAAK
QAAWKIIVAD TESSNRVVEA TAEGFWQPEQ ATLTAPYVGR YLADMPAASR LRTPRMAERI
AELAFPRYAV AQSTREGVAE LLARRDLTRG LRRAVIDADD DLRRALVART AVAAVDA
|
|---|
| |