Gene Strop_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3473 
Symbol 
ID5059942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3981296 
End bp3981694 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID640475722 
Productiojap-like protein 
Protein accessionYP_001160282 
Protein GI145595985 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTTT CCGAACGCGC ACACGAGCTG GCGACCGCCG CCGCCCAGGC TGCCGCCGAC 
AAGAGAGCGC AGGACATCGT CATCATCGAT GTGGGTGAGC AGCTCGCCAT CACCGACGCG
TTCCTGCTCG CCGCCGCCCC GAACGAGCGT CAGGTGCTCG CCATCGTCGA CGCGATCGAG
GAGCGCCTGC TCCAGCTGCC GGAGAAGGCC AAGCCGGTCC GGCGTGAGGG AGAGCGGGGC
GGTCGTTGGG TGCTGCTCGA CTACGTGGAC ATCGTCGTGC ACGTCCAGCA CTCTGAGGAG
CGCGAGTTCT ACGCATTGGA CCGGCTCTGG AAGGACTGCC CACAGATTCC CTTCGTTGAC
CGCGATCTCG CCGCCGCTGA GCCCGGCGCG GTCGAATGA
 
Protein sequence
MTVSERAHEL ATAAAQAAAD KRAQDIVIID VGEQLAITDA FLLAAAPNER QVLAIVDAIE 
ERLLQLPEKA KPVRREGERG GRWVLLDYVD IVVHVQHSEE REFYALDRLW KDCPQIPFVD
RDLAAAEPGA VE