Gene Strop_3471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3471 
Symbol 
ID5059940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3979729 
End bp3980313 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID640475720 
Producthypothetical protein 
Protein accessionYP_001160280 
Protein GI145595983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TTCTGCGTCG TAGCGTCCTG GGTGTTGCTG GTCTGGCCCT GTCCACCGGT 
GTCGTCGCCG GTCCCCTGGC CACCTACACC GACAGCACCC CGGCCTCGGC TTCGGCCGCG
GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCGAG
CAGTCACGGA TCAGCCTGGG TGACGAGCAG GTGTCGAACG TCAAGGCCAT CATCGAGGCC
ACGAAGGCCG CCGGGATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGTTTGCAG
GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AGCGCCCGTC CTCCGGCTGG GGCACGGTGG AGCAGATCAC CGACCCCGCC
TACTCCACCA CCGCGTTCCT GGACGGTCTG AAGCAGGTTG AGGGTTGGCA GGAGATGCCG
TTGACCGAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAGACCCAGG CCGCCGACCT CGTGGCCGAG CACTGGACCA GCTGA
 
Protein sequence
MNTILRRSVL GVAGLALSTG VVAGPLATYT DSTPASASAA AVQVAKPDLD TLIPHGTQGE 
QSRISLGDEQ VSNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPA YSTTAFLDGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS