| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3469 |
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| Symbol | |
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| ID | 5059938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3977634 |
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| End bp | 3978476 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640475718 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001160278 |
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| Protein GI | 145595981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.389617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCATACG ACGAGGAGAA GGTGGTCCGG GACCGCCTGC ACCGAGTGCT GCCAGCGGGC
GAGCTGTCCG GCCCCGGCCT GCCGGTGGCG GAGGCCCCGG CGGTGCTGAC GCGACCGGAG
GCGCCGGCCG GTCCGCTACG CACCCCGCCG GACGGGGCGG AGGAGGAACC GGTTTCGTCC
ACCCAGCCGG ATGGAGAACG GTCGAGTCGG GTGTTGCCGG GGCCGGGCGC GTTCGATCCG
GGGCGGCGCG GGGTACGGGC ACTGGCCGTC GTCGCCGTGC TGGTGGTGCT CGGGGCGGGC
TTCTGGGCGT GGCAGTCCCG GCCACAGATC GAGCCGGTCG CGCCGGTCGC AGAGGTGACG
CCGGTCGGCC CGCCCGCCTC CGTCGGCCCG ACGGAGGCGG GCGGTGAGCT GGTGGTGGCG
GTCGCCGGTA AGGTCCGCCG GCCGGGACTT GTCCGGGTGC CGGCCGGTGC CCGGGTCGCC
GACGCGGTGC AGGCGGCCGG TGGGGCGCTG CCCGGAGTCG ATGTCGCTCT GTTCAATCCG
GCCCGGAAGG TAACCGATGG GGAACTCATC CTGATCGGTG TCACCGCGCC ACCGGGGGCA
GCCCCCGCTG GCGGCGTCGC CCCCGGTGGG GAGGCGGGAG TGGGGCCCGG AGGCAAGGTC
AACCTCAACA CCGCCAGCCT GGCGCAGCTC GACACGTTGC CCGGAGTCGG CCCGGTGCTC
GCGCAGCGCA TCCTCGACCA CCGTCAACAG CACGGCGGCT TCCGATCGGT CAGCGACCTG
CGCCAGGTCG GTGGCATCGG CGACACCCGG TACGAGCAGC TCAAGGACTT GGTGACGGTG
TGA
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| Protein sequence | MPYDEEKVVR DRLHRVLPAG ELSGPGLPVA EAPAVLTRPE APAGPLRTPP DGAEEEPVSS
TQPDGERSSR VLPGPGAFDP GRRGVRALAV VAVLVVLGAG FWAWQSRPQI EPVAPVAEVT
PVGPPASVGP TEAGGELVVA VAGKVRRPGL VRVPAGARVA DAVQAAGGAL PGVDVALFNP
ARKVTDGELI LIGVTAPPGA APAGGVAPGG EAGVGPGGKV NLNTASLAQL DTLPGVGPVL
AQRILDHRQQ HGGFRSVSDL RQVGGIGDTR YEQLKDLVTV
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