| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3468 |
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| Symbol | |
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| ID | 5059937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3975217 |
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| End bp | 3977637 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475717 |
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| Product | ComEC/Rec2-related protein |
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| Protein accession | YP_001160277 |
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| Protein GI | 145595980 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.183145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAGCC ACGGCGACGG GCAGCGACCT GGTACCACTC GTCGGGCAGC TCCGCCGAAC
GCATCCGACC CGCCGGACCT ACGGCTGGCT GGCCTGGCCG TCGCCGCGTG GCTGGCCGCG
TTGGCCGGCC TGTACCTGCC GGCCAGGGCA TCGCTGCTCG TCGCCGCGAT CGCTGCCGTG
GTGGCCGCCG GCGGCGGGGC CTACCTACAT GGGCTTCTTG GCCGGCCGCC CGCATCGGTC
CGTCGGTACG GCTGGACGGC CATCGCCGTC CTGCTCGGTG TGGTGTGCGG GGCGAGCGTC
ACCGCCGCCC GGGTAGCGGT GCGGGACGCC ACCCCGGTGC GTGCCCTTGT CGAGGAGCGG
GCCGTCGTAA CCGTCGACCT GGTCATCCGG GACGACCCCC GGCTGGTCCG AACCGGTTCT
GGGCGGCCCG CCACGTTCCT GGTGGCAGCG GAGTCGACCC GATTCACCGG TCTCGCCGGG
CACCGGGTCG AGGCTCGGGT CCGGATGCTG GTCTTCGCTA CCGACCCGGC CTGGCGAGAG
CTGCTGCCGG GACAGCGGCT GACCGCTGAG GGCCGGCTCG CTGCTCCGCG GGGCGGCGAT
CTGACTGCCG CGGTCCTGTG GTCGACCCGG GCCCCGGCCC CACACGGGTC GCCGCCAGGC
TTGCAGCGTG CCGCCGGCAC GCTCCGCACC GGTCTCCAGG AAGCCTGCGA GCCGCTACCG
GACGAGCGGG GTGGCCTGCT GCCCGGCCTG GTGGTGGGTG ACACGAGTCG GCTACCTGAC
TCAGTGCGGG AGGACTTCCT CGCCACCGGG ATGACCCACC TGACAGCGGT TTCCGGATCC
AACGTCGCGA TCATTGTTGG TGCGGTGTTG CTGCTGGCGC GTTGGGGTCG GGCTGGTCCG
TGGCTGGCTG CGGGGTTGTG TGTGGTCGCG TTGGTGGGTT TTGTGATCCT GGTTCGTCCG
TCGCCGAGTG TGGTGCGGGC GGCGGCGATG GGGGCGATCG GGCTGGCTGC GCTTGCTGCA
GGCCGTCCGC GGGCAGCGTT GCCGGCTCTG GCCGCGGCGG TGACTGTGCT TGTGCTCGTC
GATCCTGAGC TGGCCGGGGA TCTTGGTTTC GCCCTCTCTG TTCTCGCTAC TGGTGGGTTG
TTGTTGTTGG CGCCGCGGTG GCGGGATGCG TTACGTCGGC GTCGGGTGCC GGCGGGGGTT
GCGGAGGCGT TGGCGGTGCC GGCTGCCGCG CAGTTGGCCT GCGCGCCGGT GGTCGCGGGG
ATATCGGGCA CGGTGAGTGT GGTCGCGGTT CCGGCGAACC TGTTGGTGGT GCCGGCTGTC
GCGCCGGCCA CGGTGCTCGG TGTCGTGGCG GCGGCGTTGT CGCCGCTGTG GTCGGCTGGT
GCCGAGTTTC TGGCGTGGTT GGCGAGTTGG CCGGCGTGGT GGCTGGTCAC GGTGGCGTAT
TACGGGGCGC GGGTGCCGGC GGGCGGGTTG CCGTGGCCGG CCGGGGTTGG AGGTGCGCTA
CTGCTGGCGG GGCTGACGCT GGCCTTGCTG GTGGCGGTTC GCCGTCGGGT GGTGCGTCGG
CTCGTGGCGG TGATCGCCGT GGCGGCTGTG CTCGGTGCGT TGCCGGTGCG ACTGGTGGCT
GCTGGGTGGC CGCCGGCGGG GTGGGTGGTG GTGGCATGTG CGGTCGGTCA GGGTGATGCG
TTGGTCCTGT CGGCTGGTCC GGGACGGGGC GTGGTGGTGG ACGCCGGGGC GGAGCCGGGT
GCGGTGGATC GTTGTCTGCG TCGGCTGGGT GTGCGGGAGG TGCCGCTGTT GGTGATCAGT
CATTTCCATC ACGACCACGT CGGTGGGGTG GCGGGTGTCT TCCGGGGGCG GCGGGTCGCG
GCGGTGCTGG TTCCTTCGTG GCCGGAGCCG GCGTTCGGTC GGGACCTGGT CCGGGTCGCG
GCGTCGGCGG GGTCCGCCGA GTTGATCTCT GTCCCGGTCG GTTGGGACTA TCGGGCTGGC
GCGGTGGAGT TGACGGTCGT GGGCCCACCG GCTCCGCAGC GGGGTACCCG TTCGGATCCG
AACAACAACT CGCTTGTCCT GCTGGCCACC GTCAACGGGG TGCGAATCCT GTTGACGGGA
GATGCGGAGA TCGAGGAGCA GCGGGCTCTG CTCGATCGTG CGCCGGACGG CGGGCTCCGC
GCGCATGTGT TGAAGGTCGC TCACCACGGG TCGGCGTATC AGGATCCGGC GTTTCTCGAC
GCGATCCGTC CGCTGGTGGC GGTGGTCCCG GTCGGCCGGG AGAACACCTA TGGGCATCCG
GATGCGTCGG TGCTGGATCG TCTTGCCCGG GACGGTGCGC GGGTCCTCCG TACCGACCTT
GATGGGGACG TTGCGGTGGT GACCCGACCG TCCGGGTTGG CCGTCGTCGC TCGGGGCCCG
GAGAGCTCGT CGATGCGTTA G
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| Protein sequence | MRSHGDGQRP GTTRRAAPPN ASDPPDLRLA GLAVAAWLAA LAGLYLPARA SLLVAAIAAV
VAAGGGAYLH GLLGRPPASV RRYGWTAIAV LLGVVCGASV TAARVAVRDA TPVRALVEER
AVVTVDLVIR DDPRLVRTGS GRPATFLVAA ESTRFTGLAG HRVEARVRML VFATDPAWRE
LLPGQRLTAE GRLAAPRGGD LTAAVLWSTR APAPHGSPPG LQRAAGTLRT GLQEACEPLP
DERGGLLPGL VVGDTSRLPD SVREDFLATG MTHLTAVSGS NVAIIVGAVL LLARWGRAGP
WLAAGLCVVA LVGFVILVRP SPSVVRAAAM GAIGLAALAA GRPRAALPAL AAAVTVLVLV
DPELAGDLGF ALSVLATGGL LLLAPRWRDA LRRRRVPAGV AEALAVPAAA QLACAPVVAG
ISGTVSVVAV PANLLVVPAV APATVLGVVA AALSPLWSAG AEFLAWLASW PAWWLVTVAY
YGARVPAGGL PWPAGVGGAL LLAGLTLALL VAVRRRVVRR LVAVIAVAAV LGALPVRLVA
AGWPPAGWVV VACAVGQGDA LVLSAGPGRG VVVDAGAEPG AVDRCLRRLG VREVPLLVIS
HFHHDHVGGV AGVFRGRRVA AVLVPSWPEP AFGRDLVRVA ASAGSAELIS VPVGWDYRAG
AVELTVVGPP APQRGTRSDP NNNSLVLLAT VNGVRILLTG DAEIEEQRAL LDRAPDGGLR
AHVLKVAHHG SAYQDPAFLD AIRPLVAVVP VGRENTYGHP DASVLDRLAR DGARVLRTDL
DGDVAVVTRP SGLAVVARGP ESSSMR
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