| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3458 |
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| Symbol | |
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| ID | 5059927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3965358 |
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| End bp | 3966581 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640475707 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001160267 |
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| Protein GI | 145595970 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.99275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.352624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGTC TCCTACCAGC AGGCGAGACC ATCCCCGTGG ATGGATCGCT GCCCACAGCC
GCCCTGACCT CGGTGGGAGC GCGGGGGTTC GGCGTGTACG TACACGTCCC CTTCTGCGCC
AGCCGATGTG GGTACTGCGA TTTCAATACC TACACGGCGG CGGAGCTGGG TGGTGGCGCC
AGCCGGGAGG AGTACGCCGA CACCGTCCTC GCCGAACTCG CGTTGGCTGC CCGGGTGCTG
GGCGAGAACC GCCCGTCCCG GGTCGACACG GTCTTCGTCG GCGGCGGCAC CCCCACTCTG
CTGCCCGCCG CGGACCTCGC GCGAATTCTC GACGCGATCG ACCGCACCTG GGGACTGGCC
ACCGACGCGG AGGTCACCAC GGAGGCCAAC CCGGAGTCGG TCACCCCGCG ATCCCTCGCC
GCACTGCGGG CCGCCGGCTA CACGAGGATT TCGCTGGGGA TGCAGTCCGC GTCGCCCGGG
GTGCTCGCGA TCCTGGACCG GCGGCACAGC GCCGGCCGGG CCATCGCCGC CGCCGGGGAG
GCCCGGGAGG CCGGGTTCGA CCACGTCAAC CTGGACCTGA TCTACGGGAC GCCGGGGGAG
AGTGCGGCCG ACTTCGCCGC CTCGCTCGAC GAGGTGGTCG CCGCGGGGGT GGACCACGTC
AGCGCATACT CCCTGATCGT GGAGGAGGGG ACCCGGCTCG CGGCCCAGGT GCGGCGGGGT
GAGGTGGCGC AGCCCTGTGA CGACGTCGCC GCGGACCGCT ACCTGGCCGC GGAGGCGGCC
CTCGATGCGG CCGGCTTCTC CTGGTACGAG GTCTCCAACT GGTCGCGGAC GCCGGCTGCC
CGGTGCCGGC ACAACCTCTT GTACTGGACT GGCGGCAACT GGTGGGGTCT CGGCCCGGGG
GCGCACAGCC ACGTCGGTGG GGTGCGCTGG TGGAATGTCA AACACCCCAC GGCGTACGCG
CAACGGCTCG CGGCGGGGGC GTCGCCGGGC TTGGCCCGGG AAGTGTTGAC CGCCGACGAG
GCGTACCTGG AGGACGTCAT GCTGCGTCTC CGGCTCGCCG CAGGCCTGCC GCTGGACGTG
CTGGACCCCG TCGGCCGTGC CGGTGCCGAT CGGGCCCGGG CGGCAGGTCT GCTGGCCGAG
GCGGCGTACG GCGACGGTCG GGCGGTGTTG ACCCTGCGCG GTCGGCTGCT CGCTGACGCG
GTGGTGCGGG ACCTGCTCGG CTGA
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| Protein sequence | MPGLLPAGET IPVDGSLPTA ALTSVGARGF GVYVHVPFCA SRCGYCDFNT YTAAELGGGA
SREEYADTVL AELALAARVL GENRPSRVDT VFVGGGTPTL LPAADLARIL DAIDRTWGLA
TDAEVTTEAN PESVTPRSLA ALRAAGYTRI SLGMQSASPG VLAILDRRHS AGRAIAAAGE
AREAGFDHVN LDLIYGTPGE SAADFAASLD EVVAAGVDHV SAYSLIVEEG TRLAAQVRRG
EVAQPCDDVA ADRYLAAEAA LDAAGFSWYE VSNWSRTPAA RCRHNLLYWT GGNWWGLGPG
AHSHVGGVRW WNVKHPTAYA QRLAAGASPG LAREVLTADE AYLEDVMLRL RLAAGLPLDV
LDPVGRAGAD RARAAGLLAE AAYGDGRAVL TLRGRLLADA VVRDLLG
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