| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3454 |
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| Symbol | |
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| ID | 5059923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3961335 |
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| End bp | 3962069 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640475703 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001160263 |
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| Protein GI | 145595966 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.118235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCGC CGCTGTTCCT GGTCGAATCG TTGCCCACCG CCGAGACGGC CACCCTGAAC
GGGCCGGAGG GCCATCACGC CGCGACCGTG CAGCGGTTGC GGGCGGGTGA GGAACTGCTG
CTCGCTGACG GCTGCGGCGG CACCGCCGTC GCCGTGGTCA CGGCGGTGGG CAAGGGTGCG
CTGGAGCTTC GGATCACCTC CCGGGACCAC GTGGACGCCC CCGCCCACCG GCTCGTCGTC
GTTCAGGGGC TGGCCAAGGG GGAGCGGGGT GAGCTGGCCG TGCAGGCGAT GACCGAGGTC
GGGGTGGACA CGATCGTTCC CTGGACGGCC GGGCGCTCGG TCACCCAGTG GCGGGGCGAT
CGGGGGGTAC GTGCCCGGGG GAAGTGGGTC GCCACCGCGC GGGAGGCCGC GAAGCAAGCC
CGCCGGGCCT GGCTGCCGGT GGTGGCCGGC GCACCGGCCG AGGACACCTC CGCGGTGGCC
CGCCGGATCG CCCAGGCTGC GGCGGCGTTC GTCCTGCACG AGCAGGCGGG GGAACGTCTG
GTCACCGCGG AGCTGCCCGA CCGCGGCGAG ATCGTGCTGG TGGTCGGACC CGAGGGGGGT
GTTGCCCCGG GCGAGCTGGC CGCCTTCGCC GAGGCCGGAG CTCGGACGGT GCGCCTGGGC
TCGTCGGTGC TGCGTACCTC CACCGCCGGG GTGGCGGCGC TTTCGGTGCT CGCCGCCCGT
CTTGGCCGCT GGTAG
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| Protein sequence | MSAPLFLVES LPTAETATLN GPEGHHAATV QRLRAGEELL LADGCGGTAV AVVTAVGKGA
LELRITSRDH VDAPAHRLVV VQGLAKGERG ELAVQAMTEV GVDTIVPWTA GRSVTQWRGD
RGVRARGKWV ATAREAAKQA RRAWLPVVAG APAEDTSAVA RRIAQAAAAF VLHEQAGERL
VTAELPDRGE IVLVVGPEGG VAPGELAAFA EAGARTVRLG SSVLRTSTAG VAALSVLAAR
LGRW
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