Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3447 |
Symbol | |
ID | 5059916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3954327 |
End bp | 3955166 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640475696 |
Product | DNA repair protein RecO |
Protein accession | YP_001160256 |
Protein GI | 145595959 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0180024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGT ACCGCCGACA GCTCTACCGC GACGACGCGG TGGTGCTGCG CGTGCAGAAG CTCGGCGAGT CGGACCGCAT CATCACCCTG CTCACCCGCC GGCACGGGCG GCTGCGTGCG GTGGCCCGCG GAGTGCGCCG GACCACCAGC AGGTTCGGAG CCCGGCTGGA GCCCTTCGGC CACGTCGACC TGCAACTCGC CGGCGACCCG AAGGGCCACC AGGGAAGCTC GTTGCACACG GTCAGCCAGG TCGAGGGCAT CGACCTGTAC GGCAAGCGCC TCCTCGGTGA CTACCCCCGT TACACGGCGG CGAGTGCGGT CTGCGAGACC GCGGAACGGC TCACCCCGGT AGAGCGGGAA CCGTCGCTAC GGTTGTTCCA ACTCACCCTG GGGGCGCTGC GTGCGCTGGC CAGCGGGGAG CACGCCGCGA CCCTGGTGCT GGACGCGTAT CTGCTGCGCG GCATGGCCCT CGCCGGGTGG GCGCCGGCGC TGGCCGGCTG CGCGGTCTGC GGCACGCCGG GGCGGCACCG GGCCTTCTCC GTCCCGGCCG GCGGTGCCGT CTGCCTGGAC TGTCGGCCGC CCGGCGCGGC CCACCCCGCA CCGGCCACCA TTGACCTGAT GACCGCGCTC ACCAGCGGCG ACTGGCGGGT TGCTGACGCC GCCGGGAACG GTGTTCGCCG GGAGTGCAGC GGGCTGGTCG CGGCGCACCT GCAGTGGCAT CTGGAGCGCG CGCTACGCTC GCTGCCGCTG GTGGACCGGG GCGTTGTTTC GGCCGCCGGC GCGGTCGGGA CGCCGGCCGG CGGAGTCGGG CCGGCGGCGC CCGGCGTGGA CAGGGAGTAG
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Protein sequence | MAGYRRQLYR DDAVVLRVQK LGESDRIITL LTRRHGRLRA VARGVRRTTS RFGARLEPFG HVDLQLAGDP KGHQGSSLHT VSQVEGIDLY GKRLLGDYPR YTAASAVCET AERLTPVERE PSLRLFQLTL GALRALASGE HAATLVLDAY LLRGMALAGW APALAGCAVC GTPGRHRAFS VPAGGAVCLD CRPPGAAHPA PATIDLMTAL TSGDWRVADA AGNGVRRECS GLVAAHLQWH LERALRSLPL VDRGVVSAAG AVGTPAGGVG PAAPGVDRE
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