Gene Strop_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3443 
Symbol 
ID5059912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3949724 
End bp3951151 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content75% 
IMG OID640475692 
ProductABC transporter related 
Protein accessionYP_001160252 
Protein GI145595955 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0420844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAG TCCGGTTGCG GGGCTTCGGG TGGCGGCACG CGGGGCGGAA ACGGTGGGCC 
GTACGCGGGC TCGACCTACG GATCGAGCAC GGCGAACGGG TCCTCCTGCT GGGGGCCTCC
GGGGCGGGTA AGAGCACCCT GCTCGCCGCG CTGGCCGGGC TGCTACCCGA GGACTCCGGC
GAACAGGAAG GCACCGTCGA GATCGACGGC CGGGATCCGC GCACGGCCCG AGAAGAGGTC
GGCCTGCTCT TCCAGGACCC GGAGACCCAG CTGGTGATGG CGCGCTGCGG CGACGACGTC
GCCTTCGGCC CCGAAAACCG CGGGCTACCC GCCGAGCAGA TCTGGCCGCG GGTGGACGAG
GCACTGCATC GGGTTGGCTT CCGCTACGGC CGGGACCGAC CGACCGCTGC CCTCTCCGGG
GGCGAACAGC AGCGGCTCGC CCTCGCCGGG GTGCTCGCGC TCCGCCCGAG CCTGCTGCTG
CTCGACGAGC CGACCGCCAA CCTGGACCCG GCCGGTGCGG CGCTGATCCG CGACGCGGTC
GCCACGGCGC TCGACACCGA CACCACCCTG CTCCTCGTCG AGCACCGGCT CGCCGAGGCG
CTGCCGCTGG TTGACCGGGT GGTCGTGCTG GCACCCGGCG GCGGCGTCCA GGCCGACGGC
ACCCCGCAGG CAGTCTTCGC CGCGCACGGC GAGGCGCTCG CCGCCGAGGG GGTCTGGGTG
CCGGGTCATC CGGCGCCACG GCGGCGGGCC ACCACCGCCG CCGGGTCGGA GTTGCTCGCC
GCCGACGAAC TCGCCCTGCC GCCCCGGCTG GCCACCGTCT CCCTCACCGT GCGGGCCGGC
GAGGCGCTCG CCGTCCACGG ACCCAACGGC GCCGGGAAGT CCACCCTGGC CCTCCTGCTG
GGTGGGCTGC TCGCACCGGC GGCGGGCCGG GTCACCGCAA CGGCAGAGCT GGCCGGCGGC
GACGCCCGCA CCCCGCCGCA CCGATGGCGG GCACCGGCGC TGGTGGGCCG GATCGGTTCG
GTCTTCCAGG ACCCGGAACA CCAGTTCGTC ACCGCCACCG TCGCCGACGA GCTGGCGCTG
GGCCCACGCC GCACCGGCCG AACCGAGGCG CAGGTCCGCA CCACCGTGGA CGCGCTGCTC
GACCGGCTCC GCCTGGCGGC GCTCGCCGAG GCCAACCCGT ACACCCTCTC CGGTGGCGAG
GCGCGGCGGC TGAGCGTGGC GACGGCCCTG GCCACCGCGC CCCGCCTGCT CGTCTGCGAC
GAGCCCACCT TCGGCCAGGA CCGACGGACC TGGCGGGAGC TGGTGGAGCT CTTCGCCGAG
CTGCGCGACA ACGGGCACGG TCTGGTCACA GTGACCCACG ACACGGAGTT CATCGCCGCG
CTGGCCGACC GTCAGGTAGG GCTCGAACAT CCGGGCAGCA CCCCATGA
 
Protein sequence
MSAVRLRGFG WRHAGRKRWA VRGLDLRIEH GERVLLLGAS GAGKSTLLAA LAGLLPEDSG 
EQEGTVEIDG RDPRTAREEV GLLFQDPETQ LVMARCGDDV AFGPENRGLP AEQIWPRVDE
ALHRVGFRYG RDRPTAALSG GEQQRLALAG VLALRPSLLL LDEPTANLDP AGAALIRDAV
ATALDTDTTL LLVEHRLAEA LPLVDRVVVL APGGGVQADG TPQAVFAAHG EALAAEGVWV
PGHPAPRRRA TTAAGSELLA ADELALPPRL ATVSLTVRAG EALAVHGPNG AGKSTLALLL
GGLLAPAAGR VTATAELAGG DARTPPHRWR APALVGRIGS VFQDPEHQFV TATVADELAL
GPRRTGRTEA QVRTTVDALL DRLRLAALAE ANPYTLSGGE ARRLSVATAL ATAPRLLVCD
EPTFGQDRRT WRELVELFAE LRDNGHGLVT VTHDTEFIAA LADRQVGLEH PGSTP