Gene Strop_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3441 
Symbol 
ID5059910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3947909 
End bp3948838 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content73% 
IMG OID640475690 
Productalpha/beta hydrolase fold 
Protein accessionYP_001160250 
Protein GI145595953 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.331156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0655305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACCGA CGCTAGCACC TCCGAAGATC CTTCAACAAA GGGACATCGG TACGGTCCGA 
CAGGGGTTCC TCCGGCGAAC TCCGAGTAGG CTGCCGATCA TGCGCATCGA TGTCCGAGGT
TTCGCCTTCG ATCTCCACGT CGGTGGCCCG GCGGCCGGCC CGCCGGTGCT CCTGCTGCAC
GGCTTCCCCC AGCACAGTGG GGTATGGGCC GACGTGGTGC CACTCCTGCA CGCCGCCGGG
TTGCGCACAT ACGCACTCGA TCAGCGCGGC TATTCGCCCG GCGCCCGTCC GGCGGCGGTT
TCCGCGTACC GCCTCGGTGA GCTGGTCGGC GACGCGGTGG CGGTGCTGGA GCGTCTCGGC
ATCGCCACCG CGCACGTGGT CGGGCATGAC TGGGGCGCGG CTGTCGGCTG GGCCATCGCT
GCTGAGCATC CGGCCCGGGT GCGGTCCCTG ACCGCGGTCT CCGTGCCGCA CCCGGGGGCC
TTGGCCCACG CCCTCATCAC CGACCGGTCG CAGCGGGCCC GCTCGGCGTA CATGCGGCTG
TTCCGGCGGG AAGGCACGGC GGAGGCGGTG CTGCTGGCGC TGCGGGCGAC CGGGCTGCGC
CGGATGCTGG CCGGAGCCGG CGACGCCGAG CGGGTGGCCG CGTACGTCGA GCGGATGCGC
GCGCCGGGCG CGTTGAGCGC CGCCCTGAAC TGGTACCGGG CGATGTCCCG CGGTGACCTG
GCGGCCGTCG GGCCGGTGCC GGTGCCGACG ACGTACGTCT GGAGTGACCG GGACGTCGCG
ATTGGCCGTA CCGCCGCCGA GGCCTGCGCC GCCCACGTGA CCGGTGACTA CCGCTTCGTC
GAGCTGACCG GGGTGAGTCA CTGGATTCCG GACCGGGCAC CAGCGCCGCT CGCCGACGCG
ATCGTGGCAC GGGTTCGCGA CCCGAGGTGA
 
Protein sequence
MRPTLAPPKI LQQRDIGTVR QGFLRRTPSR LPIMRIDVRG FAFDLHVGGP AAGPPVLLLH 
GFPQHSGVWA DVVPLLHAAG LRTYALDQRG YSPGARPAAV SAYRLGELVG DAVAVLERLG
IATAHVVGHD WGAAVGWAIA AEHPARVRSL TAVSVPHPGA LAHALITDRS QRARSAYMRL
FRREGTAEAV LLALRATGLR RMLAGAGDAE RVAAYVERMR APGALSAALN WYRAMSRGDL
AAVGPVPVPT TYVWSDRDVA IGRTAAEACA AHVTGDYRFV ELTGVSHWIP DRAPAPLADA
IVARVRDPR