| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3432 |
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| Symbol | |
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| ID | 5059901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3940828 |
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| End bp | 3941934 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475681 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001160241 |
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| Protein GI | 145595944 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.113177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCCTGG CGCCGATGGC GGGCATCACC AACGTCGGGT TCCGTCAGCT CTGCCGGGAA
CAGGGCGGCG GCATCTACGT CTGCGAGATG ATCACGACGG TCGCGCTGGT CGAGCGGAAC
CCCAAGACGC TGCGCATGAT CGCCTTCGGC TCCGGGGAGT CCCCGCGTAG CCTCCAGCTC
TACGGCACCG ACCCCGACAC CACGGCCGCC GCCGTACGCA TCGTTGTGGA GCGGGACCTC
GCCGACCATA TCGACCTGAA CTTCGGTTGC CCGGTCCCGA AGGTCACCCG CAGGGGCGGT
GGCGCCGCCC TGCCGTGGCG GCGTCGGCTC TTCGCCCGGC TGGTGCGGGC CGCGGTGGAC
GCCGCGTCAC CCGCCGGCGT GCCGGTAACG GTGAAGATGC GCAAGGGCAT CGATGACGAC
CACCTGACGT ACGTTGAGGC TGGCCTCGCC GCCCAGGATG CTGGTGCCGC GGCGGTGGCG
CTGCACGGGC GTACGGCTGC CCAACGGTAT TCGGGGACGG CCGACTGGGA CGCCATCGCG
ACGCTGAAGA CGGCGCTGGA CGTGCCGGTG CTGGGTAACG GCGACATCTG GGAGGCGGAC
GACGCGCTGC GGATGGTGGC GCACACCGGA GTTGACGGGG TCGTGGTGGG GCGGGGCTGC
CTGGGCCGGC CGTGGCTCTT CGCCGACCTG GAGGCTGCCT TCACCGGTTC GCCGCACCGG
CGGCTGCCCA CGTTGGGGGA GGTGGCCACG ACCATGCGTC GGCACGCGGA GCTGTTGGTC
GAGCAGTTCA CTGTCGGCGG CCGCGACGCG GCGCGCGGTG AGCGGGACGG CTGCACCGAC
TTCCGGAAGC ACGTCGCCTG GTACCTGAAG GGCTTTCCGG TCGGTAGCGA GCTGCGTCGG
GCGCTCGCGA TGATCGAAAG CTTGGCGCAC CTCGACGACC TGCTCGGCAA GCTCGACCCG
GCGGCGCCGT TCCCGGTGGA GACGCTGGGC CAGCCACGGG GTCGGACCAA CTCGCCGGGC
AAGGTGTTCC TGCCGAACGG ATGGCTGGAC AGCCGGGACG ACGACACGGT TCCGCAGGGC
GCGGAGTTGG CCGACTCGGG CGGCTGA
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| Protein sequence | MVLAPMAGIT NVGFRQLCRE QGGGIYVCEM ITTVALVERN PKTLRMIAFG SGESPRSLQL
YGTDPDTTAA AVRIVVERDL ADHIDLNFGC PVPKVTRRGG GAALPWRRRL FARLVRAAVD
AASPAGVPVT VKMRKGIDDD HLTYVEAGLA AQDAGAAAVA LHGRTAAQRY SGTADWDAIA
TLKTALDVPV LGNGDIWEAD DALRMVAHTG VDGVVVGRGC LGRPWLFADL EAAFTGSPHR
RLPTLGEVAT TMRRHAELLV EQFTVGGRDA ARGERDGCTD FRKHVAWYLK GFPVGSELRR
ALAMIESLAH LDDLLGKLDP AAPFPVETLG QPRGRTNSPG KVFLPNGWLD SRDDDTVPQG
AELADSGG
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