Gene Strop_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3417 
Symbol 
ID5059884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3920988 
End bp3921251 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content66% 
IMG OID640475664 
Producthypothetical protein 
Protein accessionYP_001160226 
Protein GI145595929 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.548763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCAT GCCTGGGTCA CGGTGCTGGC GGCAGCCCAC CGACGCCGCA ACTCGGCCCG 
CTGGTCCGTC GGGTTCGCGG TTGGCACTCG ACAGGGGCGA CGCTGCTTCT CGCCCAGGGA
GTCGACATAC GGGTGATCCA GGAGCTGCTC GGGCACTCCT CGATCAAGAT CGCCGAGGGA
TACACCCACG TCGCCTCGAA GCTGGCCCGG GACGCTACGA AGCGTATGGG AAAGCGGCTG
TTCGGAACGC CAGGTACACC CTGA
 
Protein sequence
MVSCLGHGAG GSPPTPQLGP LVRRVRGWHS TGATLLLAQG VDIRVIQELL GHSSIKIAEG 
YTHVASKLAR DATKRMGKRL FGTPGTP