| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3407 |
|---|
| Symbol | |
|---|
| ID | 5059874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3910860 |
|---|
| End bp | 3912224 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640475655 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160217 |
|---|
| Protein GI | 145595920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATA AGCACCAGGA GCACAAACCG GACCGTCTGG GCGGAACCCA GGCGAGATCA
GGGTGGCGGT GGTGGGCTGT CGGGTTGGCC GGCATGACCG GCCTGACCCT GGCCGCCGTC
GGCGGCCCCA CCGCCTCAGC CGCCGACGCC GTCGGACGAA CCCTCACCGC CGCCGACGAC
CGCCCCTCCG ACCGGGACCA CCGCAACAAG GGCGAGGACG GCAAGCACGA CGCCAAGAGC
AAGGAAAGAG GGGGAAAGGA GCCCAATGGC ACACCCGTCC CTTGTGACAC CGACGCTCTG
ATCGCCGCGA TCACCCTCGC CAACGCCCGC GACGGCGCCG TGCTCGACCT CGCCAAAAAC
TGCACCTACC TACTCACCGC CGACATCGAC GGCAACGGCC TGCCCGCCAT CACCGCCCCC
ATCACCCTCA ACGGCGGCAA GAACACCACC ATCGAACGCG CCGCCACCGC CGACCCGTTC
CGCATCCTCA CCGTCGACAC CGGTGGCAAC CTCACCCTCA ACCACCTCAT CATCACCGGC
GGACAAACCA CCAGCAACGG TGGGGGAATC TTCGTCCGAG CCGGTGGAAC GTTGATCACA
AACCACAGCA CAATCGCCCG TAACATCGCT CAGACCCCGG GCGGCGGAAT CGCCAATAGC
GGCACCACCA GACTCGCCCA CTCTCGCGTC GAAAACAACA GCACAAACCA GCTGGGAGGC
GGAGTAAACA ATATTGGGCT TCTGGAGGCC ATCAAATCCC ACATCGATAT GAACGACGCC
ACTATTGGCG GCGGCATCTA TGGATCCGGC AACACTGTCA TCAAGGACGG CAGCATCTCC
GGAAACCAGG CGACCGTGAC CGGAGGACTA TTTCTGGCTG GCGCCAACGG AATTGTCACC
AACACCAGAA TCACCGAAAA TTCCAGTGCC GCCGCTGGCG CTGGAGGCGT CCAGGTCGAG
GCGACCGCGC AGCTGACGAT GCGCCACGTC AACCTGTCAG ACAATACGTC GCCCGCCACC
GCCGGTGGGC TGCTCGTCGC AGAGGGGGAC AATTTCGCCC TGGTCGAAGA CAGCCTCATC
AAGAACAACA CCGCCGCGGA CCCCGGTGGG GGAGTCTTCA ACAGCGGAGA AACGGTGTTG
CGACGTACCA AGGTAGTCGG CAACCAGGCC AGTCAGGGCG GCGGCATCCA GAACTTCGGC
ACGCTCAGCC TCTTCACGTC GAAGGTGGTC AAGAACATCG CCGTCACCGA CGGTGGGGGC
ATCTTCAACA GCGGCGGCGT GGTGAACCTG AACACCGCCA CCGGCACGGT CGTTATCAAG
AACCGGCCGA ACAACTGCGT CGACGTACCC GGTTGCGCGG GCTGA
|
|---|
| Protein sequence | MNHKHQEHKP DRLGGTQARS GWRWWAVGLA GMTGLTLAAV GGPTASAADA VGRTLTAADD
RPSDRDHRNK GEDGKHDAKS KERGGKEPNG TPVPCDTDAL IAAITLANAR DGAVLDLAKN
CTYLLTADID GNGLPAITAP ITLNGGKNTT IERAATADPF RILTVDTGGN LTLNHLIITG
GQTTSNGGGI FVRAGGTLIT NHSTIARNIA QTPGGGIANS GTTRLAHSRV ENNSTNQLGG
GVNNIGLLEA IKSHIDMNDA TIGGGIYGSG NTVIKDGSIS GNQATVTGGL FLAGANGIVT
NTRITENSSA AAGAGGVQVE ATAQLTMRHV NLSDNTSPAT AGGLLVAEGD NFALVEDSLI
KNNTAADPGG GVFNSGETVL RRTKVVGNQA SQGGGIQNFG TLSLFTSKVV KNIAVTDGGG
IFNSGGVVNL NTATGTVVIK NRPNNCVDVP GCAG
|
|---|
| |