| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3406 |
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| Symbol | |
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| ID | 5059873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3909243 |
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| End bp | 3910682 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640475654 |
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| Product | parallel beta-helix repeat-containing protein |
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| Protein accession | YP_001160216 |
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| Protein GI | 145595919 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.525217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC AGAACCACAT CCACGAACCC GAACCGGAGC GCCCTGGCGC GGACCGGGCG
AGGTCACGGC GGCGATGGTG GGCCGTCGGG CTCGCCAGCG TGGCCGGCCT GGCCCTCACC
ACCGTCGGAG TCGCCGCCAC CCCGGCCGCC GACGCCATCG GACGCACCCT CAGCGCCGAC
GACCGCTCCG ACAAACGTGA CCAGCCACAT GAAGGTGACC GCCGCGACGA CGACGGCGGC
AAACGTGACG ACGCCAAGAA CAAGAGCGAC GAGGGCAAGA ACGACAAGGG CAAGGGCGAC
AAGGGCAAGG GGAAGAAGAC GGCCACCCCC AAGGGCACCC CCGTGCCCTG CGACGCGGAC
GCGCTGATCG CCGCGATCAC CCTGGCCAAC GCCCGCGACG GCGCCGTGCT CGACCTCGCC
AAGGACTGCA CCTACCTGCT CACCGCCGAC ATCGACGGCA ACGGCCTGCC CGCCATCACC
GCCCCCATCA CCCTCAACGG CGGCAAGAAC ACCACCATCG AACGCGCCGC CGCCGTCGAC
CCGTTCCGCA TCCTCACCGT CGACACCGGC GGCAACCTCA CCCTCAACAA GCTGACCATC
ACCGGCGGCC AGACCGACAG CGACGGCGGC GGCATCCTCG TCAACCCGGC CGGCACCCTC
ACCACCAACC ACAGCACCAT CACCCGCAAC ATCACCAACG CCAATGGCGG CGGCATCGCC
AACAACGGCA CCACAACTCT CCACCACTCC ACCGTCAGCC GAAACATCTC CGGCACTACC
GGCGGCGGCA TCTTCAGCAC CGGTCTACTG ACCGTCAAAA AGTCCCACGT AGCTGACAAC
ACCGCCGGCG CCGCTGGTGG CGGCATCAAC AGCAATGAGG GCACGATGCT GGTTGAGCAC
AGCCGAATTA CCGGCAACCA GACTGCGACC AGCGCTGGCG GCGTGGAACT GTTCGGAGGA
ACCGGAATTG TCACGAAGAC CGAGATCACC AACAATACCG CCAGTGCAAC TGGCGGCGTT
CTGGCGAACT CCGGGCAGCT CACCCTCAGA GCAGTGGTCA TCGCCAACAA CACGGCGATA
TCGGGGCTGG CCGGCGGGCT GTCGGTGAAC CCCGCCACCA CCACGGTGGT CGAGGACAGC
ACCATCAAGA ACAACACCGC TGCCGCAAAC GGCGGTGGAA TCTTCAACTT CGATTCGCTG
GTATTGCGAA ACACGAAGGT CATCGGAAAC CAGTCAGGAA ACCAGGGAGG CGGAATCCTC
AACGGACCTA ACGCCACCCT CTCCCTCTTC GACACACAGG TGGTCAAGAA CATCGCCGTT
ACCGACGGTG GGGGCATCTT CAACAGCGGC GGCGTGGTGA ACCTGAACAC CGCCACCGGC
ACCATCGTCA TCAAGAACCG ACCCAACAAC TGCGTCGACG TACCCGGCTG CGCCGGATAG
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| Protein sequence | MNQQNHIHEP EPERPGADRA RSRRRWWAVG LASVAGLALT TVGVAATPAA DAIGRTLSAD
DRSDKRDQPH EGDRRDDDGG KRDDAKNKSD EGKNDKGKGD KGKGKKTATP KGTPVPCDAD
ALIAAITLAN ARDGAVLDLA KDCTYLLTAD IDGNGLPAIT APITLNGGKN TTIERAAAVD
PFRILTVDTG GNLTLNKLTI TGGQTDSDGG GILVNPAGTL TTNHSTITRN ITNANGGGIA
NNGTTTLHHS TVSRNISGTT GGGIFSTGLL TVKKSHVADN TAGAAGGGIN SNEGTMLVEH
SRITGNQTAT SAGGVELFGG TGIVTKTEIT NNTASATGGV LANSGQLTLR AVVIANNTAI
SGLAGGLSVN PATTTVVEDS TIKNNTAAAN GGGIFNFDSL VLRNTKVIGN QSGNQGGGIL
NGPNATLSLF DTQVVKNIAV TDGGGIFNSG GVVNLNTATG TIVIKNRPNN CVDVPGCAG
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