| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3398 |
|---|
| Symbol | |
|---|
| ID | 5059865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3900636 |
|---|
| End bp | 3901637 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475646 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001160208 |
|---|
| Protein GI | 145595911 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAA TCCAGGTAAC CGCCTTCGGC GGCCCAGAGG TGCTGTCGCC TGCGGAACTG
CCCGACCCGG CGCCCGGGCC CGGCCAGGTC GTCGTCGCCC TGGCTGCGGC AGACGTCATC
TTCCTCGACA CCCTGCTGCG CAGCGGCTGG GGACAGGACT TCTTCCCCCG CACGTTGCCC
TATGTGCCGG GTGGCGGCGG AGCAGGCGTA GTCGTGCAGA CCGGCGACGG GGTGGACCCG
GCATGGATCG GCCGGCGGGT AGTCGTACAG ACCAGCACCG GCTACGCCGA ACGCGTCGCC
GCGCACGTCG AGGAGATCCT GCCAGTTCCC GACGGCCTGG CCATCGAGGC AGCCGCGGCA
CTGGTGCACG ACGGCGTGAC CGCGCTCCGC CTGGACCAAC TGGGCACACC ACGAAAGAGA
GAGTGGGTGC TGGTCTCCGC TGCCGCTGGT GGAGCCGGAT CACTGCTGGT GCAACTAGCC
GTCAACGCCG GAGCGCGGGT GGTAGCCGCC GCTTCCACCG ACGCCAAGCT GGCGCTGGCC
CGCCAACTGG GCGCGGAGAT CGCTGTCGAC TACACCCGGC CGGGCTGGAT TGATCAGGTG
CGGGAAGCAA CAGGCGGCGG TGTCGCGCTG GTGTACGACG GGGCTGGTGG CCCAACCGGC
ACGGCCACCC TGGACGCGGT CGCCGACGGC GGACGGCTCG TCACCTACGG CACCGCCGAC
GGCCTCGCGA CCCCGGACCC CGATTCGGCC GCGGGCCGCG GCATTCGGAT ATTCGCACCG
CTGTTGGACG GCCCGCCGGA CCGACAGACC GTACGCGAAC TGATGGGCCT GGCCCTGGAA
CGGACCACGC GGGGACGCAT GCACCCGGTG ATCGGCGCCA CCTACCCGCT GGAACGGGCC
GCTGCCGCTC ATCGCGCACT GGCCATGCGC ACCACGGTCG GCAAGTCACT GTTGCTGGTC
GGAAACCAGT CGGGCCTTCC GAACTCGCCG TCGATGCCGT GA
|
|---|
| Protein sequence | MRAIQVTAFG GPEVLSPAEL PDPAPGPGQV VVALAAADVI FLDTLLRSGW GQDFFPRTLP
YVPGGGGAGV VVQTGDGVDP AWIGRRVVVQ TSTGYAERVA AHVEEILPVP DGLAIEAAAA
LVHDGVTALR LDQLGTPRKR EWVLVSAAAG GAGSLLVQLA VNAGARVVAA ASTDAKLALA
RQLGAEIAVD YTRPGWIDQV REATGGGVAL VYDGAGGPTG TATLDAVADG GRLVTYGTAD
GLATPDPDSA AGRGIRIFAP LLDGPPDRQT VRELMGLALE RTTRGRMHPV IGATYPLERA
AAAHRALAMR TTVGKSLLLV GNQSGLPNSP SMP
|
|---|
| |