Gene Strop_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3373 
SymbolaceE 
ID5059840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3869042 
End bp3871780 
Gene Length2739 bp 
Protein Length912 aa 
Translation table11 
GC content68% 
IMG OID640475622 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_001160184 
Protein GI145595887 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACGG AACGCAAGCG CCCGGTGATC AGTGCCGGTC TGCCGAGCCA GCTTCCGGAT 
ATCGACCCCG ACGAGACCGG CGAATGGGTC GAGTCGCTCG ACGGTGTTGT CGACGAGCGC
GGGACGAAAC GCGCCCGCTA CGTCATGCTG CGCCTGCTGG AACGAGCCCG CGAGCGTCAG
GTCGGGGTGC CATCCCTGAC CACCACGGAC TACATCAACA CCATCGCACC CGAGCGGGAG
CCCTGGTTCC CCGGCGACGA ACACGTCGAG CGGCGCATCC GGGCCTACAT CCGGTGGAAC
GCCGCGGTGC TGGTACACCG GGCCCAGCGG CCGGACATCG GCGTCGGTGG ACACATCTCG
ACGTTCGCCA GCTCGGCCTC GCTCTACGAG GTCGGCTTCA ACCACTTCTT CCGGGGTAAG
GACCACCCGG GCGGCGGCGA CCACCTCTTC TACCAGGGGC ACGCCTCCCC CGGCATGTAC
GCGCGGGCGT TTCTCGAGGG GCGGCTCAGC GAGCACCAGC TCGACGGGTT CCGCCAGGAG
CTGTCCCACC CCGGTGGCGG GCTGCCGTCG TACCCGCACC CCCGGCTGAT GCCGGACTTC
TGGGAGTTCC CCACCGTCTC GATGGGCCTC GGCGGCGTCA ACGCCATCTA CCAGGCCCGG
TTCAACCGCT ACCTGCACCA CCGCGGCATC AAGGACACCT CCGACCAGCA CGTGTGGGCG
TTCCTCGGTG ACGGCGAGAT GGACGAGCCG GAGACACTGG GCGCGATCGG GACGGCCGCC
CGGGAGGAGC TGGACAACCT CACCTTCGTC ATCAACTGCA ACCTGCAACG CCTGGACGGA
CCGGTCCGCG GCAACGGCAA GGTCATGCAG GAGCTGGAGG CGTTCTTCCG GGGTGCCGGC
TGGAACGTCG TCAAGGTCGT CTGGGGCCGC GAGTGGGACC CACTGCTCGC CCGGGACACC
GACGGCGCCC TGGTCAACCT GATGAACACC ACGCCCGACG GTGACTACCA GACCTACAAG
GCGGAGTCCG GGGCATACAT CCGGGAGCAC TTCTTCGGCC GTGACCCGCG GACCCGCAAG
ATGGTCGAGC ACCTCAGCGA CGACGAGATC TGGAACCTGA AGCGGGGTGG CCACGACTAC
CGGAAGCTCT ACGCGGCGTA CAAGGCGGCG GTGGAGCACA CCGGGCAGCC GACGGTGATC
CTGGCCAAGA CCATCAAGGG TTGGACGCTC GGCTCGCACT TCGAGGGGCG CAACGCCACC
CACCAGATGA AGAAGCTGAC GCTGGATGAT CTGAAGACCT TCCGCGACCG GCTCTACCTG
GACATCCCGG ACAAGGCGCT GGAAGAGAAC CCCTACCTGC CGCCGTACTA CCGGCCGGAG
GCGAAGTCCG ACGAGATCGA GTACCTACAC GAGCGCCGCC GGCAGCTCGG CGGCTACCTG
CCGTCCCGAC GGCCCGGTAC GAAGCGGCTG ACCATCCCCG GTCCAGAGAG CTTCGCCGAT
GTCAAGCGCG GTTCCGGTAA GCAGAAGGTG GCCACCACGA TGGCCTTCAA CCGCCTGCTC
AAGGACCTGA TGAAGGACCG CGAGTTTGGC CAGCGCTGGG TTCCGATCAT CCCGGACGAG
GCCCGCACCT TCGGTATGGA CTCGCTCTTC CCGACACGGA AGATCTACTC GCCGCACGGC
CAGCGCTACA CCTCGGTTGA CCGGGAGCTG TTCCTGTCGT ACAAGGAGGC GACGGGCGGG
CAGATCCTGC ACGAGGGCAT CAACGAGGTC GGCTCGGTCG CCTCCTTCAC CGCGGCCGGC
TCCGCGTACG CCACACACAA CGAGCCGATG ATCCCGATGT ACATCTTCTA CTCGATGTTC
GGGTTCCAGC GGACCGCGGA CGGGCTCTGG GCGGCGGCCG ACCAGATGGC CCGGGGCTTC
CTGCTCGGCG CGACCGCCGG ACGGACCACG CTCAACGGCG AGGGCCTCCA GCACGAGGAC
GGTCATTCGC TGTTGATCGC CGCCACCAAC CCGGCGGTGG TCGCCTACGA CCCGGCGTTC
GCCTTCGAGA TCGCGCACAT TGTGGAGAAC GGCCTGCACC GTATGTACGG CGAGGCGCAG
GAGAACGTCT TCTACTACCT GACGGTCTAC AACGAGCCGA TCGTGCAGCC GGCGGAGCCG
GCAGAGGTCG ACGTCGAGGG CATCCTGAAG GGCATCTACC GGTACTCGCC GGCGCCCCAG
GTGGACGGCC CGCCGGCACA GCTTCTCGCC TCCGGCACCG GCCTGCAGTG GGCGCTCAAG
GCGCAGGACC TGCTTGCCCG CGACTGGGGG GTGGCCGCCA GCGTCTGGTC CGTGACCTCC
TGGACCGAGT TGCGCCGCGA CGCGGTCCAG GCGGAGGAGC ACAACCTGCT CAACCCGACC
GGGGAGCAGC AGGTTCCGTA CGTGGCGGCC AAGCTGGCCG ACGCCGACGG GCCGAAGGTC
GCGGTCAGCG ACTGGATGCG CGCGGTGCCG GATCTGATTT CCCGCTGGGT GCCCGGCGAC
TACACCTCAC TCGGCACCTG CGGCTTCGGT ATGTCGGACA CCCGGCACGC GCTGCGTCGA
TACTTCCACG TGGACGCGGA GTCAATCGTG GTCGCGACGT TGCGGCAGCT CGCTCTCCGC
GGCGCGGTAC CGGCGGGGGT TCCCGCCGAG GCGGCCAAGA AGTACGCCAT CGACGACGTC
GGGGCCGCCC CGGTCGGTGA GACCGGCGGC GACAGCTGA
 
Protein sequence
MATERKRPVI SAGLPSQLPD IDPDETGEWV ESLDGVVDER GTKRARYVML RLLERARERQ 
VGVPSLTTTD YINTIAPERE PWFPGDEHVE RRIRAYIRWN AAVLVHRAQR PDIGVGGHIS
TFASSASLYE VGFNHFFRGK DHPGGGDHLF YQGHASPGMY ARAFLEGRLS EHQLDGFRQE
LSHPGGGLPS YPHPRLMPDF WEFPTVSMGL GGVNAIYQAR FNRYLHHRGI KDTSDQHVWA
FLGDGEMDEP ETLGAIGTAA REELDNLTFV INCNLQRLDG PVRGNGKVMQ ELEAFFRGAG
WNVVKVVWGR EWDPLLARDT DGALVNLMNT TPDGDYQTYK AESGAYIREH FFGRDPRTRK
MVEHLSDDEI WNLKRGGHDY RKLYAAYKAA VEHTGQPTVI LAKTIKGWTL GSHFEGRNAT
HQMKKLTLDD LKTFRDRLYL DIPDKALEEN PYLPPYYRPE AKSDEIEYLH ERRRQLGGYL
PSRRPGTKRL TIPGPESFAD VKRGSGKQKV ATTMAFNRLL KDLMKDREFG QRWVPIIPDE
ARTFGMDSLF PTRKIYSPHG QRYTSVDREL FLSYKEATGG QILHEGINEV GSVASFTAAG
SAYATHNEPM IPMYIFYSMF GFQRTADGLW AAADQMARGF LLGATAGRTT LNGEGLQHED
GHSLLIAATN PAVVAYDPAF AFEIAHIVEN GLHRMYGEAQ ENVFYYLTVY NEPIVQPAEP
AEVDVEGILK GIYRYSPAPQ VDGPPAQLLA SGTGLQWALK AQDLLARDWG VAASVWSVTS
WTELRRDAVQ AEEHNLLNPT GEQQVPYVAA KLADADGPKV AVSDWMRAVP DLISRWVPGD
YTSLGTCGFG MSDTRHALRR YFHVDAESIV VATLRQLALR GAVPAGVPAE AAKKYAIDDV
GAAPVGETGG DS