Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3373 |
Symbol | aceE |
ID | 5059840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3869042 |
End bp | 3871780 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640475622 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_001160184 |
Protein GI | 145595887 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCACGG AACGCAAGCG CCCGGTGATC AGTGCCGGTC TGCCGAGCCA GCTTCCGGAT ATCGACCCCG ACGAGACCGG CGAATGGGTC GAGTCGCTCG ACGGTGTTGT CGACGAGCGC GGGACGAAAC GCGCCCGCTA CGTCATGCTG CGCCTGCTGG AACGAGCCCG CGAGCGTCAG GTCGGGGTGC CATCCCTGAC CACCACGGAC TACATCAACA CCATCGCACC CGAGCGGGAG CCCTGGTTCC CCGGCGACGA ACACGTCGAG CGGCGCATCC GGGCCTACAT CCGGTGGAAC GCCGCGGTGC TGGTACACCG GGCCCAGCGG CCGGACATCG GCGTCGGTGG ACACATCTCG ACGTTCGCCA GCTCGGCCTC GCTCTACGAG GTCGGCTTCA ACCACTTCTT CCGGGGTAAG GACCACCCGG GCGGCGGCGA CCACCTCTTC TACCAGGGGC ACGCCTCCCC CGGCATGTAC GCGCGGGCGT TTCTCGAGGG GCGGCTCAGC GAGCACCAGC TCGACGGGTT CCGCCAGGAG CTGTCCCACC CCGGTGGCGG GCTGCCGTCG TACCCGCACC CCCGGCTGAT GCCGGACTTC TGGGAGTTCC CCACCGTCTC GATGGGCCTC GGCGGCGTCA ACGCCATCTA CCAGGCCCGG TTCAACCGCT ACCTGCACCA CCGCGGCATC AAGGACACCT CCGACCAGCA CGTGTGGGCG TTCCTCGGTG ACGGCGAGAT GGACGAGCCG GAGACACTGG GCGCGATCGG GACGGCCGCC CGGGAGGAGC TGGACAACCT CACCTTCGTC ATCAACTGCA ACCTGCAACG CCTGGACGGA CCGGTCCGCG GCAACGGCAA GGTCATGCAG GAGCTGGAGG CGTTCTTCCG GGGTGCCGGC TGGAACGTCG TCAAGGTCGT CTGGGGCCGC GAGTGGGACC CACTGCTCGC CCGGGACACC GACGGCGCCC TGGTCAACCT GATGAACACC ACGCCCGACG GTGACTACCA GACCTACAAG GCGGAGTCCG GGGCATACAT CCGGGAGCAC TTCTTCGGCC GTGACCCGCG GACCCGCAAG ATGGTCGAGC ACCTCAGCGA CGACGAGATC TGGAACCTGA AGCGGGGTGG CCACGACTAC CGGAAGCTCT ACGCGGCGTA CAAGGCGGCG GTGGAGCACA CCGGGCAGCC GACGGTGATC CTGGCCAAGA CCATCAAGGG TTGGACGCTC GGCTCGCACT TCGAGGGGCG CAACGCCACC CACCAGATGA AGAAGCTGAC GCTGGATGAT CTGAAGACCT TCCGCGACCG GCTCTACCTG GACATCCCGG ACAAGGCGCT GGAAGAGAAC CCCTACCTGC CGCCGTACTA CCGGCCGGAG GCGAAGTCCG ACGAGATCGA GTACCTACAC GAGCGCCGCC GGCAGCTCGG CGGCTACCTG CCGTCCCGAC GGCCCGGTAC GAAGCGGCTG ACCATCCCCG GTCCAGAGAG CTTCGCCGAT GTCAAGCGCG GTTCCGGTAA GCAGAAGGTG GCCACCACGA TGGCCTTCAA CCGCCTGCTC AAGGACCTGA TGAAGGACCG CGAGTTTGGC CAGCGCTGGG TTCCGATCAT CCCGGACGAG GCCCGCACCT TCGGTATGGA CTCGCTCTTC CCGACACGGA AGATCTACTC GCCGCACGGC CAGCGCTACA CCTCGGTTGA CCGGGAGCTG TTCCTGTCGT ACAAGGAGGC GACGGGCGGG CAGATCCTGC ACGAGGGCAT CAACGAGGTC GGCTCGGTCG CCTCCTTCAC CGCGGCCGGC TCCGCGTACG CCACACACAA CGAGCCGATG ATCCCGATGT ACATCTTCTA CTCGATGTTC GGGTTCCAGC GGACCGCGGA CGGGCTCTGG GCGGCGGCCG ACCAGATGGC CCGGGGCTTC CTGCTCGGCG CGACCGCCGG ACGGACCACG CTCAACGGCG AGGGCCTCCA GCACGAGGAC GGTCATTCGC TGTTGATCGC CGCCACCAAC CCGGCGGTGG TCGCCTACGA CCCGGCGTTC GCCTTCGAGA TCGCGCACAT TGTGGAGAAC GGCCTGCACC GTATGTACGG CGAGGCGCAG GAGAACGTCT TCTACTACCT GACGGTCTAC AACGAGCCGA TCGTGCAGCC GGCGGAGCCG GCAGAGGTCG ACGTCGAGGG CATCCTGAAG GGCATCTACC GGTACTCGCC GGCGCCCCAG GTGGACGGCC CGCCGGCACA GCTTCTCGCC TCCGGCACCG GCCTGCAGTG GGCGCTCAAG GCGCAGGACC TGCTTGCCCG CGACTGGGGG GTGGCCGCCA GCGTCTGGTC CGTGACCTCC TGGACCGAGT TGCGCCGCGA CGCGGTCCAG GCGGAGGAGC ACAACCTGCT CAACCCGACC GGGGAGCAGC AGGTTCCGTA CGTGGCGGCC AAGCTGGCCG ACGCCGACGG GCCGAAGGTC GCGGTCAGCG ACTGGATGCG CGCGGTGCCG GATCTGATTT CCCGCTGGGT GCCCGGCGAC TACACCTCAC TCGGCACCTG CGGCTTCGGT ATGTCGGACA CCCGGCACGC GCTGCGTCGA TACTTCCACG TGGACGCGGA GTCAATCGTG GTCGCGACGT TGCGGCAGCT CGCTCTCCGC GGCGCGGTAC CGGCGGGGGT TCCCGCCGAG GCGGCCAAGA AGTACGCCAT CGACGACGTC GGGGCCGCCC CGGTCGGTGA GACCGGCGGC GACAGCTGA
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Protein sequence | MATERKRPVI SAGLPSQLPD IDPDETGEWV ESLDGVVDER GTKRARYVML RLLERARERQ VGVPSLTTTD YINTIAPERE PWFPGDEHVE RRIRAYIRWN AAVLVHRAQR PDIGVGGHIS TFASSASLYE VGFNHFFRGK DHPGGGDHLF YQGHASPGMY ARAFLEGRLS EHQLDGFRQE LSHPGGGLPS YPHPRLMPDF WEFPTVSMGL GGVNAIYQAR FNRYLHHRGI KDTSDQHVWA FLGDGEMDEP ETLGAIGTAA REELDNLTFV INCNLQRLDG PVRGNGKVMQ ELEAFFRGAG WNVVKVVWGR EWDPLLARDT DGALVNLMNT TPDGDYQTYK AESGAYIREH FFGRDPRTRK MVEHLSDDEI WNLKRGGHDY RKLYAAYKAA VEHTGQPTVI LAKTIKGWTL GSHFEGRNAT HQMKKLTLDD LKTFRDRLYL DIPDKALEEN PYLPPYYRPE AKSDEIEYLH ERRRQLGGYL PSRRPGTKRL TIPGPESFAD VKRGSGKQKV ATTMAFNRLL KDLMKDREFG QRWVPIIPDE ARTFGMDSLF PTRKIYSPHG QRYTSVDREL FLSYKEATGG QILHEGINEV GSVASFTAAG SAYATHNEPM IPMYIFYSMF GFQRTADGLW AAADQMARGF LLGATAGRTT LNGEGLQHED GHSLLIAATN PAVVAYDPAF AFEIAHIVEN GLHRMYGEAQ ENVFYYLTVY NEPIVQPAEP AEVDVEGILK GIYRYSPAPQ VDGPPAQLLA SGTGLQWALK AQDLLARDWG VAASVWSVTS WTELRRDAVQ AEEHNLLNPT GEQQVPYVAA KLADADGPKV AVSDWMRAVP DLISRWVPGD YTSLGTCGFG MSDTRHALRR YFHVDAESIV VATLRQLALR GAVPAGVPAE AAKKYAIDDV GAAPVGETGG DS
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