| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3364 |
|---|
| Symbol | |
|---|
| ID | 5059830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3859860 |
|---|
| End bp | 3861008 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475612 |
|---|
| Product | polysaccharide pyruvyl transferase |
|---|
| Protein accession | YP_001160175 |
|---|
| Protein GI | 145595878 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03609] polysaccharide pyruvyl transferase CsaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.324545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTG GCACCGGCCT GACCATCGGT GTGCTCGGCT CGTACGGCGG TCGCAACCTT
GGTGACGAGG CGATCCTCAC CGGCCTTCTG ACCGACCTGC GCGAGCAGGA GCCGAACGCA
CGGATCATCG TCTTCTCCCG CAACCCCGAT CACACCCGGA CGGCTCACCC GGAGGTGGAG
GCGGTGCCGT GGGAGGGGGT GAGCCGCACC GACTCGTCCC CGCTGCTGGC CCAGCTCGAT
CTGCTCATCC TGGGGGGCGG CGGCATCCTC TACGACCAGG AGGCCCGCCG CTACCTGCGG
GTGGTCCGGG TTGCGCAGGA GCGCGGCCTG CCGCTGCTCA CCTACGCGGT GGGGGTCGGC
CCGCTCAGCG AGATGGTGGA CACCGGGATG GTCCGCGAGA CGCTGGCCGG GGCGACCCAG
GTCACGGTGC GGGACCAGGA GTCTCGGATG CTTCTGGAGG AGGCTGGGCT GCTCAACCCG
ATCACGGTCA CCGCGGATCC GGCGTTTCTC CTGGAGCCCG AGGACTTCCC CGTGCACCTA
CTCCGGGAGG AGGGGGTGCC AGCGGGCCGG CGTCTGGTCG GCATGAGTGT GCGGGAACCG
GGGCGGGCCG CTGAACGGCT CGATGTCGAC GGCTACCACC GGCTCCTGGC CCAGATCGGC
GACTTCCTGG TACACCGAAT CGACGCCGAT GTCCTCTTCG TCCCGATGGA ACGGGACGAT
ATCCGGCACT CCCACGGCGT GCTGTCACAC ATGGTCGCCG CCGAACGGGG GCGCATCCTG
CACGGCAGCT ACTCCCCCCA GCAGGTGCTC GGCCTGATGC GCCACTTCGA TCTGGCGGTC
GGCATGCGGC TGCACTTTCT GATCTTCGCC GCGATGGTGA ACACCCCGTT CCTCCCCCTG
CCGTACGCCG GCAAGGTCTT CGACCTGGCC CAGCGGCTCG GCGTCCCCGC CCTTCGCGGG
GTGGAGCGGG AGGTCGAGGG CCCGCTGCTG GCCGAGGTCG ACCGGCTGTG GGACGAACGG
GAGCAGCGCG CCGAGGCCAC CGCCCGGCGG GTCGCCGAGG TGTGCGAGGA GGCCCGGGGC
ACCTCGAAGG TAACCCGCTC GGTGCTGGAG AGTCTCCGGA CCCGGTCGTT GGTCTCCGTG
GAGGGGTGA
|
|---|
| Protein sequence | MTAGTGLTIG VLGSYGGRNL GDEAILTGLL TDLREQEPNA RIIVFSRNPD HTRTAHPEVE
AVPWEGVSRT DSSPLLAQLD LLILGGGGIL YDQEARRYLR VVRVAQERGL PLLTYAVGVG
PLSEMVDTGM VRETLAGATQ VTVRDQESRM LLEEAGLLNP ITVTADPAFL LEPEDFPVHL
LREEGVPAGR RLVGMSVREP GRAAERLDVD GYHRLLAQIG DFLVHRIDAD VLFVPMERDD
IRHSHGVLSH MVAAERGRIL HGSYSPQQVL GLMRHFDLAV GMRLHFLIFA AMVNTPFLPL
PYAGKVFDLA QRLGVPALRG VEREVEGPLL AEVDRLWDER EQRAEATARR VAEVCEEARG
TSKVTRSVLE SLRTRSLVSV EG
|
|---|
| |