Gene Strop_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3350 
Symbol 
ID5059815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3845473 
End bp3845781 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID640475597 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001160161 
Protein GI145595864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.315603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAGC CTTACCCCCG AGAGTTCCGT GATGACGTCG TGCAGGTGGC CCGTGACCGC 
GAGCCGGGCG TGACGGTCGA GCAGATCGCG AAGGACTTCG GGGTTCACCC GATGACGTTG
TTCAAGTGGC TGCGTCAGGC CGACATCGAC GCTGGTGCGA AGCCCGGTAC GCCCAGTGGC
GAGTCAGCCG AGCTGCGCGA GGCCCGCAAG CGGATCCGGT TGTTGGAGCA GGAGAACGAG
GTCCTGCGTC GGGCCGCTGC TTACTTGTCG CAGGCGCATC TGCCGGGAAA AGGCTCTACC
CGCTCGTGA
 
Protein sequence
MPKPYPREFR DDVVQVARDR EPGVTVEQIA KDFGVHPMTL FKWLRQADID AGAKPGTPSG 
ESAELREARK RIRLLEQENE VLRRAAAYLS QAHLPGKGST RS