| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3340 |
|---|
| Symbol | |
|---|
| ID | 5059805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3835390 |
|---|
| End bp | 3837186 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475588 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_001160152 |
|---|
| Protein GI | 145595855 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.316593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC TGCGTCTCGC ACTCTGCCAG GTCAACCCGA ACGTTGGTGA CCTCGCTGGC
AACGCCACGA TCATCCGTGA ATGGGCTCGC CGCGCCGCCG ACGCCGGCGC CCAACTGATC
GCCTTCCCGG AGCTGACCCT GACTGGCTAC CCGGTCGAGG ACCTGGTCTT CCGCCGCTCC
TTCGTGGCAG CGTCGAAGGC GGCGCTGGAC GAGCTCGCAG CCGACCTCGC CGCCGACGGG
CTGGGCGACC TGGCGGTGGT GGTCGGCTAT CTGGACGCGG ACGGCCCACC ACAGGTCAAC
GGCGACGCCG AGCCGGGTCA CGGGGCGCGT AACGCGGCGG CCCTGCTGCA CGGCGGGAAG
ACCGTGGCCA CCTACTTCAA ACACCATCTG CCGAACTACG GCGTCTTTGA CGAGGACCGC
TACTTCGTGC CGGGCGAGAC GCTGTCCGTG GTGCGAGTCG GCGGGGTGGA TGTCACGCTG
ACCATCTGTG AGGACCTGTG GCAGGTCGGG GGCCCGTTCG CCGCTGCCCG CCAGGCCGGT
GTCGGCCTCG TGCTCAACAT CAACGGCTCG CCGTACGAGC TGAACAAGGA CGACGTCCGG
CTCCCGCTGG TCCGCCGCCG CGCCGCCGAG GCCAAGGCCA CCATCGCGTA CGTCAACATG
GTTGGCGGCC AGGACGAGCT GGTGTTCGAG GGCGACTCCA TGATCGTGGC GGCGGAGGGG
GAGTTGCTCG CCCGGGCGCC GCAATTCGTC GAGCACCTGC TGGTACACGA CCTGGATCTC
CCCGCCGCCG CCGACGGCCC GCCCGCCGAC ATCGAGCTGG CCGACGGGAT GCGGGTGCTC
CACCGCTGCA TCGGTTCGCT GCCGGCCGCC CCCACCGACA CGTTGGCGGC CAGTGAGATC
GCCGAACCGG CGGCCGACGA GGCGGAGGTG TGGCAGGCGC TCCTGCTGGG CCTGCGCGAC
TACGTCGACA AGAACCACTT CCCCTCGGTG GTGCTCGGCC TCTCCGGCGG CATCGACTCG
TCGGTCGTCG CGGCCCTGGC GGTGGACGCA CTCGGCGCGG ACCGGGTGGT CGGGGTGTCG
CTGCCAAGCC AGCACTCCTC CGAGCACTCC CGAGAAGACG CAGCAGAGTT GGCCAAGCGC
ACCGGGCTGG ACTACCGGAT CGAGCCGATC CAACCGATCG TCGAAACGTT CCTGGCCAAC
CTGTCGCTCT CCGGTCTCTC GGTGGAGAAC CTCCAAGCCC GGGTCCGCGG GGTGATCCTG
ATGGCCCTGT CGAACCAGGA GGGCCACCTG GTGCTCACCA CCGGCAACAA GAGCGAACTG
GCGGTCGGTT ACTCCACCCT GTACGGCGAC TCGGTCGGCG GCTTCAACCC CGTCAAGGAC
GTCTGGAAGA CCCTGATCTG GCAGCTCGCC CGGTGGCGAA ACGCCGAGGC GGTTCGCCGA
GGCGAGACCC CACCGATCCC GGAGAACTCG ATCAGCAAAC CTCCGTCGGC CGAGCTGAGC
CCCGGTCAGC TGGACTCCGA CACGTTGCCG GAGTACGACC TGCTCGACCC GATCCTCGTC
GGCTACATCG ACGGCGACCT GGGACGGGAC GGGCTCATCG AGGCCGGCCA CGACCCGGCG
CTCGTCGACC AGGTGCTGCG GATGGTGGAT ACCGCCGAGT ACAAGCGGCG CCAGTCCGCT
CCCGGCACGA AAATATCGAT GAAGGCCTTC GGGCGGGACC GCCGCCTGCC CATCACCAAC
CGCTGGCGCG AGGACGGCCG AGCGGCCGGG GCAGCCGAAC GACTCGGGGG CGGATGA
|
|---|
| Protein sequence | MTTLRLALCQ VNPNVGDLAG NATIIREWAR RAADAGAQLI AFPELTLTGY PVEDLVFRRS
FVAASKAALD ELAADLAADG LGDLAVVVGY LDADGPPQVN GDAEPGHGAR NAAALLHGGK
TVATYFKHHL PNYGVFDEDR YFVPGETLSV VRVGGVDVTL TICEDLWQVG GPFAAARQAG
VGLVLNINGS PYELNKDDVR LPLVRRRAAE AKATIAYVNM VGGQDELVFE GDSMIVAAEG
ELLARAPQFV EHLLVHDLDL PAAADGPPAD IELADGMRVL HRCIGSLPAA PTDTLAASEI
AEPAADEAEV WQALLLGLRD YVDKNHFPSV VLGLSGGIDS SVVAALAVDA LGADRVVGVS
LPSQHSSEHS REDAAELAKR TGLDYRIEPI QPIVETFLAN LSLSGLSVEN LQARVRGVIL
MALSNQEGHL VLTTGNKSEL AVGYSTLYGD SVGGFNPVKD VWKTLIWQLA RWRNAEAVRR
GETPPIPENS ISKPPSAELS PGQLDSDTLP EYDLLDPILV GYIDGDLGRD GLIEAGHDPA
LVDQVLRMVD TAEYKRRQSA PGTKISMKAF GRDRRLPITN RWREDGRAAG AAERLGGG
|
|---|
| |