Gene Strop_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3331 
Symbol 
ID5059796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3822821 
End bp3823216 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content70% 
IMG OID640475579 
ProductRDD domain-containing protein 
Protein accessionYP_001160143 
Protein GI145595846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00294231 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCT CGGCTGACCA GCCCGTACCG GCCCCCTCCG GAGTCTCCTC CAGGCCGGGT 
CTGGGCCCGC GCTTCGGCGC ATTAGTGATC GACTGGGTGC TCTGCGTGCT GGTCGCGAGT
ATCTTCGCCG ATCCGCTCCG CGACGGATGG GCCCCCGTAG CCGTGCTCGT CGCCGAGTAC
GGCTTCTTCG TCGGCCTCTT CGCCCAGACC CCCGGGATGT ACCTCACCCG GATCCGCTGC
GTCTCCTGGA CCAGCGGTGG TCGGATCGGT GTGCTGCGCG CCCTGCTCCG CGGCGGCATG
CTCGCGCTTG TGATACCCGC CCTGATCATG GATGCCGACC GCCGCGGCCT GCACGATCGC
GCAGCGGGCT CGGTCATCGC ACCTGTCGTC CGCTGA
 
Protein sequence
MTTSADQPVP APSGVSSRPG LGPRFGALVI DWVLCVLVAS IFADPLRDGW APVAVLVAEY 
GFFVGLFAQT PGMYLTRIRC VSWTSGGRIG VLRALLRGGM LALVIPALIM DADRRGLHDR
AAGSVIAPVV R