Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3331 |
Symbol | |
ID | 5059796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3822821 |
End bp | 3823216 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640475579 |
Product | RDD domain-containing protein |
Protein accession | YP_001160143 |
Protein GI | 145595846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00294231 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCT CGGCTGACCA GCCCGTACCG GCCCCCTCCG GAGTCTCCTC CAGGCCGGGT CTGGGCCCGC GCTTCGGCGC ATTAGTGATC GACTGGGTGC TCTGCGTGCT GGTCGCGAGT ATCTTCGCCG ATCCGCTCCG CGACGGATGG GCCCCCGTAG CCGTGCTCGT CGCCGAGTAC GGCTTCTTCG TCGGCCTCTT CGCCCAGACC CCCGGGATGT ACCTCACCCG GATCCGCTGC GTCTCCTGGA CCAGCGGTGG TCGGATCGGT GTGCTGCGCG CCCTGCTCCG CGGCGGCATG CTCGCGCTTG TGATACCCGC CCTGATCATG GATGCCGACC GCCGCGGCCT GCACGATCGC GCAGCGGGCT CGGTCATCGC ACCTGTCGTC CGCTGA
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Protein sequence | MTTSADQPVP APSGVSSRPG LGPRFGALVI DWVLCVLVAS IFADPLRDGW APVAVLVAEY GFFVGLFAQT PGMYLTRIRC VSWTSGGRIG VLRALLRGGM LALVIPALIM DADRRGLHDR AAGSVIAPVV R
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