| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3324 |
|---|
| Symbol | |
|---|
| ID | 5059789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3814923 |
|---|
| End bp | 3815834 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640475572 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160136 |
|---|
| Protein GI | 145595839 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
|---|
| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTC TGATGGCCGG TGCGTCCGGC TTCCTCGGCA CCCGGCTGGC CGACCGGCTC
ACCGCGGACG GGCACCACGT AACGCGGCTG GTTCGTCGGC CGCCGCGCGA CGCCGACGAA
CGACAGTGGA ACCCGACCGC GGCGCAGCTC GACCCGGCGG TGGTGGCGGA GGCGGACGCC
GTGGTCAACC TGGCCGGCGC CGGCGTCGGT GACCGCCGGT GGAACGACGC CTACCGGCGG
GTCATCCGCT CCAGTCGTGT GGACACCACC ACCACCTTGG CGATCACGAT CGCCGGGCTG
CCGGCCGCTG ACCGCCCAGA GGTGCTGGTC AACTCGTCGG CGGTGGGGTG GTACGGCAAC
ACCGGTGACC GGGTTGTCGA CGAGGAGGCG GCGGCCGGTG AGGGCTTCCT GGCCGATGTC
TGCCGGGTGT GGGAGGCCGC GACCCGGCCG GCCGAGGACG CCGGGGTACG CGTGGTACGG
CTACGGACCG GGTTGCCGCT ACACCGCGAC GGCGGCCTAC TCAAGCCGCA GCTGCTGCCG
TTCCGGCTCG GCATCGCGGG TCGACTGGGC AGTGGCCGGC AGTGGCTGCC GTGGATCGCG
ATGGTGGACT GGCTGGACGC CGCCGCCCTC ACCATCGGGC GGGCCGACCT CGCCGGCCCG
GTCAACGCGG TCGGGCCGGC ACCGGTGACC AACGCCGAGT TCACCCGAGA ACTGGCCCGG
CAGTTGCACC GTCCGGCGAT CATCCCGATC CCGGCGCTGG CGCTGAAGGT GGCCCTCGGC
GGCTTCGCGC AAGAGGCGCT GACCAGTGCT CGAGTCCTGC CTGGGGTGTT GACCCAGGCG
GGTTTCGACT ACCGCCACCC GCATCTGGCC AGCGCCCTGA ACGCCGCGCT CGCGGCGGAG
CCGGATCGAT GA
|
|---|
| Protein sequence | MRILMAGASG FLGTRLADRL TADGHHVTRL VRRPPRDADE RQWNPTAAQL DPAVVAEADA
VVNLAGAGVG DRRWNDAYRR VIRSSRVDTT TTLAITIAGL PAADRPEVLV NSSAVGWYGN
TGDRVVDEEA AAGEGFLADV CRVWEAATRP AEDAGVRVVR LRTGLPLHRD GGLLKPQLLP
FRLGIAGRLG SGRQWLPWIA MVDWLDAAAL TIGRADLAGP VNAVGPAPVT NAEFTRELAR
QLHRPAIIPI PALALKVALG GFAQEALTSA RVLPGVLTQA GFDYRHPHLA SALNAALAAE
PDR
|
|---|
| |