| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3313 |
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| Symbol | |
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| ID | 5059778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3799799 |
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| End bp | 3801682 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640475561 |
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| Product | cobalbumin biosynthesis protein |
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| Protein accession | YP_001160125 |
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| Protein GI | 145595828 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase
[COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.249655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.573172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTG ACGGGTGGAA CACGGTCCTG GTGCTCGGCG GAATCCGGTC GGGAAAGTCC
GAGTTCGCCG AGGCCCTGGT GGCCGATGCG CCGACGGTCC GGTATGTGGC CACCGCCGCC
GACAACAGCA CCGACGACGA GGAGTGGGCC GCCCGCCTCG AAGTCCACCG CGCCCGCCGG
CCGACGACGT GGACCACGGA GGAGACCGCG GGAGAAGCAC GCCGGCTGGC GGAGGTGCTG
GCCGCCGCGC AGCCCTCCGA GACGCTGCTT GTTGATGACA TCGGTGGCTG GGTGACGGCT
CTCCTCGGCC CTGCCCATCA ACCCACCGAC CTCACGGCCA CTATCGCCGA GCTGGCCACG
GCGGTCCGCT CCTGCCCCGC CCGGCTGGTG CTGGTGAGCG CCGAGGTCGG CCTCTCGCTG
GTGCCGACGA CCCCGCTCGG CCGCGCCTTC ACCGACGCGC TCGGCACCGC CAACCGGGCG
ATCGCCGACG CCGTTGACAC GGTCGTGTTG GTGGTCGCCG GCCAGCCCAG CTGGCTCAAG
CCACCCCCGC CGACCCGCCC GGCCGCCGTC CCGGCACAGG TCACGCCGGC CGCCGCCGGC
ACCAGAGTCG CTACCGGCCC GACCCTCGCA CCGATGCCGC TGCCGGAGGT GCTGACCCCG
AGCCCCCCGC CCTCGACGGC CGAACCCGCC GGGGCCGATG GCACCCCCTG GTCGACGCCG
CCGGTGGCCG CAACCGGCCT GACCATCGAG CCCGGCCTGG AGCTGCCCAT GCCCGACGAG
GATGCCGGCT CGCAGGCCGT CGAGCGGGTG GCCACCCGGG ACCTGCCGGG CGCTGGTTTC
GGCGGGCTCA CCCAGTTGGT CGAGTTCGCC GCCGCCACCC AGGGCACTCC GCGGCCGGCA
CCGTGGGGCA GCATCCGGAT GCTGCTGGTG CATGGTGATC ACGCGGGCGG TGTCGCCGCC
GGCACCGCTC CCGGTGACTC CGCCCGCCGA GCCCAGGAGG CCCGGGACGG CCAGGGTGCG
TGGGCCCGCC TCGCCGCCGA GGCCGGGGCC GAGCTGCAGG TGGTTGACGC CCCCGCCGCA
GACCCGATCG AAACCGACCC GGCGCTCCCC CTCAGCCAGG TCGAGGCGGC GCTACAGCTC
GGCTGGCGGC TCGCCGACCA GGCCGCTCAC GCGGGCGTAC GGCTGCTGGT GCTGGGGGCT
TGCGGAGCCG GCACCGACGC CGCCGCGGCA GCGGTGCTCG CCGCCACGGC CGGCGCCGAA
CCACCCGCCG TCCTCACCCG GGTACGCACC GACGCCGGCG AGTACGACGA CGCCGCGTGG
ATGGTCCGCT GCGCGGCCGT CCGGGATGGG CTGCACCGCA GCCGCCACTC GTCCCGTGGG
CCCAAGGAGA TCCTGGCCGA GGTGGGCGGC GGCGACATCG CGGTCGCCAC CGGCGTGCTG
CTCGGCGCTG CCGCGCGGCG GCTGCCAGTG CTCCTGGACG GGCCGGTCGG GGTTGCTGCC
GGTCTGGTCA GCCGTGACCT GGCCGGCCCG GCCCGGCACT GGTGCCTCCT CGCCGACCAC
GGCGGGCACC CCGGCGTCCA GCTCGCCGCC GACGTGCTCG GCCTCGCTCC CCTGCTTGAT
CTACGGCTGG ACCTGGGCGA GGGCGGGAAC GCGCTGGTGG CGCTGCCGTT GCTGCGGTCG
GCGCTGGCCT TGGCCACGGC GCTGCCGGCG CACCCGTCGC TGCGGGTCGA GTCGGAACCG
GCCAAGCCGA CGGAGCAACC GGAGCCGGCG ACGCCGGCGG CCGACGAGCC GGAATTCCGC
GAGCCGGAAC CGGCCGGACC AGGGCCCACC AGCACCGATC CGGAGTCCAC GCCGCTGGAT
TCATCCGGCT GGCGTGCCGG CTGA
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| Protein sequence | MSIDGWNTVL VLGGIRSGKS EFAEALVADA PTVRYVATAA DNSTDDEEWA ARLEVHRARR
PTTWTTEETA GEARRLAEVL AAAQPSETLL VDDIGGWVTA LLGPAHQPTD LTATIAELAT
AVRSCPARLV LVSAEVGLSL VPTTPLGRAF TDALGTANRA IADAVDTVVL VVAGQPSWLK
PPPPTRPAAV PAQVTPAAAG TRVATGPTLA PMPLPEVLTP SPPPSTAEPA GADGTPWSTP
PVAATGLTIE PGLELPMPDE DAGSQAVERV ATRDLPGAGF GGLTQLVEFA AATQGTPRPA
PWGSIRMLLV HGDHAGGVAA GTAPGDSARR AQEARDGQGA WARLAAEAGA ELQVVDAPAA
DPIETDPALP LSQVEAALQL GWRLADQAAH AGVRLLVLGA CGAGTDAAAA AVLAATAGAE
PPAVLTRVRT DAGEYDDAAW MVRCAAVRDG LHRSRHSSRG PKEILAEVGG GDIAVATGVL
LGAAARRLPV LLDGPVGVAA GLVSRDLAGP ARHWCLLADH GGHPGVQLAA DVLGLAPLLD
LRLDLGEGGN ALVALPLLRS ALALATALPA HPSLRVESEP AKPTEQPEPA TPAADEPEFR
EPEPAGPGPT STDPESTPLD SSGWRAG
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