| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3309 |
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| Symbol | |
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| ID | 5059774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3794190 |
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| End bp | 3797417 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640475557 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001160121 |
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| Protein GI | 145595824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.317295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCG GCGGCTACGA CGACCCGTGG CACCACCTCG CCAAGCCGTC CTGGATGGTC
GAGCCGACGA ACGAGTGGCA TCCTCAGTTC CGCGGCCAGC GCTACCCCGG CGACATCGGC
ATCGAGCACA CCCCGCCGCC CGCCCCGCGC GGACGAGCCG CCGTTGTCGG CCGGGCCACG
GTGCCCCCGC TCGCGCCGAC CCGCCCCGAC GGAACCTACA CCGGCCGCTC CTGGGATGAC
CAGGACGACC GCCACGCCCA CAACCACGAG GAGCTGCGTC GCCGGCCGGG CGAGGTACCC
CCGGTGGCCG ACCGGGGCCG GCGGTCGCCG CCGCGCGGCA CTCGCGACGG TGACCCTGGC
TGGGAACGGA AGAGCCACCG CACCGACTCT GGGCGCGGTC AAAACGTCCG CCCGGACCGG
CACGACGACC GGAGCCCGTG GCACGAACCC GGAGGGCGCA GTCAACCGAT CTCCCCCGCC
CGGCATCCAG AACCGGGCTG GCTACCCGAA CCGGACGAGG AGCGACCCCA GGGACGCGAC
CGCCACGCCC CCGGTCGGGA CGTAGGAGAG CCGCCACCTC GGACCCGCTA TCCGTGGGGA
CGGTCGACCG GCACCGATCC TGGTCCGCCC GGCGCGCCGC CGGAGAGCAG CGGTGGGCAC
CCGAGACCGA CCGGGCCCCG GGGCAATCGT GATGGACGCG TTGACCCGTA CCCACGACGG
CACCCGGCCG GCCCCGGCCA CCCCACCGAA CACGGCATCG TCCACCCGCA GCGTGACGCG
GCACCAAGAC CGGTACGCCA CCCCGACCGG CACCCAGGCC AGCAGCCGTA CCCCAACCGG
CGGCCCGACA CCGGACGCCC CTGGACCCCA CCCCAGCCGG GACCACACCA GGAGAACCCC
CGACCCGGCG TCTCACCCGG ACCGCACCTC CCGCCACCCC ACCGACCGTC TCAGGGCGGT
CCCCCGACGA GCACGTCGGC GCCCCCGTAC GGCCGACCGG TGTCCGGTGC GCCCAGCCGA
CCGGTGTCCG GCGCCGGGAC GCCCCCGCAG CCCCATCCGC ACCCCGACCG CCCGGTCACC
GGCGCACGTC CCCGACCGAC GCCGACGCCA GAGGCTGCCG GACCATCACC AGCCGCCACC
GGACCGCAGC CACGGCGGTA TGTTCCGCCA CCACCCACCA CCGATCCCGT CGGGCCGGCA
CCAGGCCCGG GTGGGCCAAA CGCCTGGTTC GGATCGGCCA CCGCTCCCGC CGAGCCGACC
TCGCCCGCCG AACCGACCAC CAGCCCCGCC GAGCCAACGC CGCCCAGCGC CGACGCGCCG
CCACCGACCA CCGCACCAGA CCTGCCCGAC GACAGGCCAG CCGCCGCGTC ATCGCCCGCG
ACGGCGCCGG CCAACACCCT GCACGAGTAC GCCGAACCCG CCAGCATGCC CGAGGAGGAG
ACGGAACCCG CCAGGACCGC AGGGGAGATC GGGTCAGCCG ATGCCGCACC GGCCGCTGCT
GTCGTCCTCA ACAGCAGCAG CAGCAGCGAC GAAGCTAAGG ACGAGGATCC CGCCCCGATA
GCGGGGGCTG CCCCGACGAA GGAGCCAGAC CCGGCACAAG CCGACGCTGA CCCGGAAGGA
GGACCGGAAG CCAGACCCGG TCCCACCGCC GAACCCGCCT CGCTGGACCC GGAGTCCGCG
ACGCCACAGG TCACGGCGGA CCGGGCCCCG GACTCACACC CGGAAGCGGA AGCGGAGCCG
GAACCGGAAG CGGAACCGGA AGCGGAACCG GAACCGGAAG CGGCGCCGGA ACCGGAAGCG
GAAGCGGAAG CGGAAGCGGA AGCGGAGACT GCGGCGACGC CGACGGACCA TGCCACGGCG
AACGCGACGG TTCCGCCCAC CGCGGACCGG AGCGACCCAC CGGGTGCCGC GGATGTCGAG
GACACCGCCC CACCGGGCGA CCCCGAACGG GTGCTGGCCA CCCACCCCTG GCGACTGGAT
CCGACCACAC TCCGCGAGGT CATCTCCGAC CCCGAGCAAC TCCGGAGTCT CCGACACCGG
CTGACCAGGA AACTCGACAC GGCCATGGAC AACCGGTCCC GGGCCCGACT GCTCAGTCTG
CGGGCCGTGG CCTCCCGGGC GGCTGGTGAC CTGGACGACG CGCTGGCAGA CGGCCGACTG
GCCCTGACCT ACGCGGAGGC CACCGGCGAG TTGCGCCGAT CCGCTCTCGC GCAGGCCCGG
CTGGCACACG TGCTGCGGTG GCGGGGCGAG TACAACGAAG CCGACCGCCT CTTCGCCCAG
GCGAATTCGC CGGAACTGCC CGATCGGCTG CGGGCGGCGC TACACGAGCA TGCCGGGCGG
TGCTGCGTTG ACCAGGGCCG GCTGATCGAG GCGTGTCTTC ACTTCGAGCG GGCGTTGGAC
CTACGCGGTA CCGCCGATGC GGAGTTGCTG GACCGGGTAC GGGTGAGTCT GGACGCGGTC
GCCGACCGGG CCGCCGAGAC CGGCTTCGGG CCGTACCCCC GCAGCAGGGC GGAGTTGCTG
GAGCCGGAAC AACCGCCGGT GCCGGCGCGC GACGGCGACC TCTGGGGTTA CGCCGACCCG
GACGGGTACC TGGTCATCGG GGCGGAGTAT GCGGAGGCAC AGCCGTTCCG GGAGGGCCTG
GCCTGGGTTC GCCGCCCGGA CGACCAACGA TGGTCGCTAC TCGATCGATC TGGCAGCACC
GTGTTGACGG CTTCATGGCT GGTGGTCCGC CCGTTCGCCG ACGGGCTGGC CTGGGTGTCG
CAGGGCGAGC CCGGTGGCTG GCGTGCGATT GACCCGCAGG GCGAGGTCGT GGTGCCACCG
GGCTTCGCCG ACGTACGCCC GTTCCGCCAC GGGATCGCCG TGGTCCGGCG TGAGGGGTGG
GGCGCGGTGG ACCACGCCGG CCGGCTGGTG GTACCGACCC GCTACCACGG GTTCGCCACC
CGGCTCGTTG CCGGCGGACA GGTGGATGGC TTCACCGAGG ATGGGCTGGC GGTCGTTGAC
CTGGCCGGGC GGTACGGCGT GGTGGACCGG ACGGGCCGGG TGGTCGTCAC ACCGGTGCAC
GCGGCGTTGG TCGTGCACCC CGTGGCCTAC CTGGTAGCCA CCGCCGCCGG CCGGTGGGGG
GCGTTGGATC GGCAGGGCGG ACCGCTGATC GAGCCGACGT ATCTCGACCA GGCCGAGGTG
CTCGCCGAGA TCGAAAAGCT GCTCACCGAT GCGGTGCCGC TGCTCTGA
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| Protein sequence | MSRGGYDDPW HHLAKPSWMV EPTNEWHPQF RGQRYPGDIG IEHTPPPAPR GRAAVVGRAT
VPPLAPTRPD GTYTGRSWDD QDDRHAHNHE ELRRRPGEVP PVADRGRRSP PRGTRDGDPG
WERKSHRTDS GRGQNVRPDR HDDRSPWHEP GGRSQPISPA RHPEPGWLPE PDEERPQGRD
RHAPGRDVGE PPPRTRYPWG RSTGTDPGPP GAPPESSGGH PRPTGPRGNR DGRVDPYPRR
HPAGPGHPTE HGIVHPQRDA APRPVRHPDR HPGQQPYPNR RPDTGRPWTP PQPGPHQENP
RPGVSPGPHL PPPHRPSQGG PPTSTSAPPY GRPVSGAPSR PVSGAGTPPQ PHPHPDRPVT
GARPRPTPTP EAAGPSPAAT GPQPRRYVPP PPTTDPVGPA PGPGGPNAWF GSATAPAEPT
SPAEPTTSPA EPTPPSADAP PPTTAPDLPD DRPAAASSPA TAPANTLHEY AEPASMPEEE
TEPARTAGEI GSADAAPAAA VVLNSSSSSD EAKDEDPAPI AGAAPTKEPD PAQADADPEG
GPEARPGPTA EPASLDPESA TPQVTADRAP DSHPEAEAEP EPEAEPEAEP EPEAAPEPEA
EAEAEAEAET AATPTDHATA NATVPPTADR SDPPGAADVE DTAPPGDPER VLATHPWRLD
PTTLREVISD PEQLRSLRHR LTRKLDTAMD NRSRARLLSL RAVASRAAGD LDDALADGRL
ALTYAEATGE LRRSALAQAR LAHVLRWRGE YNEADRLFAQ ANSPELPDRL RAALHEHAGR
CCVDQGRLIE ACLHFERALD LRGTADAELL DRVRVSLDAV ADRAAETGFG PYPRSRAELL
EPEQPPVPAR DGDLWGYADP DGYLVIGAEY AEAQPFREGL AWVRRPDDQR WSLLDRSGST
VLTASWLVVR PFADGLAWVS QGEPGGWRAI DPQGEVVVPP GFADVRPFRH GIAVVRREGW
GAVDHAGRLV VPTRYHGFAT RLVAGGQVDG FTEDGLAVVD LAGRYGVVDR TGRVVVTPVH
AALVVHPVAY LVATAAGRWG ALDRQGGPLI EPTYLDQAEV LAEIEKLLTD AVPLL
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